RNA id: CI01000186_00413028_00415878.mRNA


Basic Information

Item Value
RNA id CI01000186_00413028_00415878.mRNA
length 1248
RNA type mRNA
GC content 0.43
exon number 5
gene id CI01000186_00413028_00415878
representative False

Chromosome Information

Item Value
chromosome id CI01000186
NCBI id null
chromosome length 966831
location 412601 ~ 416323 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTATAAATGGCACGTTAACTAGCAGGGCAGGGTATTGACACACAATTCACGTTTCAATTGGATTTACAATTTTTTTTTAATGTCAAATCTCTGGGATAATGCTGTAAACTATACGGGGAAGCAGTTGGTACATTACTATATAAGGTTAAATGAACAATTTTGCAAACAAGGCAGATTTGATATTAATGTTATAACTTTTAATGAGTCATAAACTTGTTTTCATAATGGATTTATTCAACCATACATGAAATATTGAAGAACGGGTTAAGTTAAAATGTAATATCTAGAGTGCATGTTTTTATCACATTTATTGAGTTTCATGAAAAAATCAACAGAATTTCAAAGTCGAGACTATTTCATAAATAAAATAACAAATCTCATTACTTTTATGTAACGGTAACATCTCTTACGTTGTGCAGATTGAGCCATGCATCGCGACTGCCCTCTGGACTGCAAGGTGTACGTTGGGAATCTGGGAAACAATGGGAATAAGTCCGAACTGGAGAGGGCGTTCGGTTATTACGGACCCCTGAGGAGCGTGTGGGTGGCCAGGAACCCTCCTGGCTTTGCGTTCGTTGAGTTCGAGGACCCTCGTGACGCCACAGACGCCGTCAGAGAGCTGGACGGACGCCGACGTCCACGCGACGACTACCGCAGGCGAAGCCCGCCTCCCAGGCGCAGATCGCCCAGGAGGAGGAGCTTCAGTCGCAGTCGTAGCAGAGAACGTAGGAGGGAGAGATCGCTGTCCCGCGACAGGAACCACAAGCCTTCGCGATCTTTCTCCCGATCGAGGAGTCGTTCCAGATCTAATGACCGGAAATGAACCACAACTCTGAGAAAAACGTTGTGACGGGAAAACGTCGATCAAAAACTTTGAAAAGACTTTATTGCTCCGAGTCCCCCATTTATTTTGTTTTTTTTATGAACATTATTTTAGCGGTTCTCTTTCCTTCTGTAGCTGCGGTTTTAATGCGACAGCATTCCATCTCACACTTCTTTTAAGACCTTTTTTTTTTTTTTTTTAATTTTATTTGTTTTTGTCGGTGAATGTGATTGGTCCTGCTGCGCTGAGCTCATTTCCTGTCGTCTGAGCTCGACCGCAAGCGTTTTGCTTTGTTTGTGTGCGATCAGAGGGGGAAGGTGTAACGGCACTGTGTCGCCAGCAGGGGGTGGAATGAAGAACAGCTTTCATTCTCGTGTTTGTTTTTTTCCTTGTAGTGTTTGTACTGTTTATAATGTTGATCTGAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU432298 lncRNA upstream 92479 318162 ~ 320122 (+) True G378208
TU432303 lncRNA upstream 95069 317330 ~ 317532 (+) True G378213
TU432285 lncRNA upstream 164427 245430 ~ 248174 (+) True G378204
TU432284 lncRNA upstream 166623 245430 ~ 245978 (+) False G378204
TU432169 lncRNA upstream 247154 162974 ~ 165447 (+) True G378117
TU432420 lncRNA downstream 72499 488802 ~ 492677 (+) True G378300
TU432444 lncRNA downstream 149693 565996 ~ 566341 (+) True G378322
TU432446 lncRNA downstream 150659 568776 ~ 568827 (+) True G378323
TU432451 lncRNA downstream 220715 637018 ~ 637549 (+) True G378325
TU432453 lncRNA downstream 233509 649812 ~ 650154 (+) True G378327
CI01000186_00402892_00406010.mRNA mRNA upstream 6468 402892 ~ 406133 (+) True CI01000186_00402892_00406010
CI01000186_00295882_00296578.mRNA mRNA upstream 115650 295669 ~ 296951 (+) True CI01000186_00295882_00296578
CI01000186_00272056_00278805.mRNA mRNA upstream 133424 271668 ~ 279177 (+) True CI01000186_00272056_00278805
CI01000186_00252556_00256882.mRNA mRNA upstream 155332 252556 ~ 257269 (+) True CI01000186_00252556_00256882
CI01000186_00235234_00237816.mRNA mRNA upstream 174480 234897 ~ 238121 (+) True CI01000186_00235234_00237816
CI01000186_00420359_00420723.mRNA mRNA downstream 4056 420359 ~ 421445 (+) True CI01000186_00420359_00420723
CI01000186_00422121_00422913.mRNA mRNA downstream 5779 422082 ~ 424110 (+) True CI01000186_00422121_00422913
CI01000186_00427652_00430661.mRNA mRNA downstream 11349 427652 ~ 431316 (+) True CI01000186_00427652_00430661
CI01000186_00444836_00447109.mRNA mRNA downstream 28481 444784 ~ 447234 (+) True CI01000186_00444836_00447109
CI01000186_00447837_00449357.mRNA mRNA downstream 31534 447837 ~ 449357 (+) True CI01000186_00447837_00449357
TU432150 other upstream 399106 11415 ~ 13495 (+) False G378108
TU432491 other downstream 478205 894508 ~ 896717 (+) True G378343

Expression Profile