RNA id: TU432797


Basic Information

Item Value
RNA id TU432797
length 231
lncRNA type sense_over
GC content 0.39
exon number 1
gene id CI01000186_00723511_00725818
representative True

Chromosome Information

Item Value
chromosome id CI01000186
NCBI id null
chromosome length 966831
location 723145 ~ 725921 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CCGCTCATGATCATGTAAGGCCAGTAAACTGTAAGAGATGCAACAATAAAGCTGTTTGAAGGAACACCACCAGATGTTCATCATCTCAAGACAATATTGAAAATATTTGCACAGAATTTGAAGCACTTCAACAAAAACAACATTTGTACTCTTCAACCTGGCACGTAGTTATTTTCTGTACTAACGGACATGAGGTACACAGAGCTTCAGATGTTTCCATCCCAAACAAAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU432791 lncRNA downstream 19480 702288 ~ 703665 (-) True G378604
TU432786 lncRNA downstream 50396 672409 ~ 672749 (-) True G378600
TU432732 lncRNA downstream 51149 667046 ~ 671996 (-) True G378552
TU432740 lncRNA downstream 68253 653803 ~ 654892 (-) True G378560
TU432744 lncRNA downstream 84052 637649 ~ 639093 (-) True G378564
TU432804 lncRNA upstream 4321 727696 ~ 727916 (-) True G378616
TU432828 lncRNA upstream 14965 738340 ~ 738623 (-) True G378622
TU432829 lncRNA upstream 18413 741788 ~ 742067 (-) True G378623
TU432835 lncRNA upstream 27835 751210 ~ 751413 (-) True CI01000186_00749734_00761177
TU432837 lncRNA upstream 36518 759893 ~ 760214 (-) True G378631
CI01000186_00656484_00658437.mRNA mRNA downstream 64531 656293 ~ 658614 (-) True CI01000186_00656484_00658437
CI01000186_00640328_00644798.mRNA mRNA downstream 74959 639172 ~ 648186 (-) True CI01000186_00640328_00644798
CI01000186_00588218_00590230.mRNA mRNA downstream 132341 588218 ~ 590804 (-) True CI01000186_00588218_00590230
CI01000186_00525649_00532282.mRNA mRNA downstream 190792 525556 ~ 532353 (-) True CI01000186_00525649_00532282
CI01000186_00485805_00522951.mRNA mRNA downstream 199378 485805 ~ 523767 (-) False CI01000186_00485805_00522951
CI01000186_00749734_00761177.mRNA mRNA upstream 26168 749543 ~ 761177 (-) False CI01000186_00749734_00761177
CI01000186_00763236_00766749.mRNA mRNA upstream 39707 763082 ~ 766749 (-) True CI01000186_00763236_00766749
CI01000186_00768176_00773034.mRNA mRNA upstream 44306 767681 ~ 773102 (-) True CI01000186_00768176_00773034
CI01000186_00777653_00779924.mRNA mRNA upstream 53345 776720 ~ 782157 (-) True CI01000186_00777653_00779924
CI01000186_00799178_00799351.mRNA mRNA upstream 75570 798945 ~ 799351 (-) False CI01000186_00799178_00799351
TU432574 other downstream 234662 488357 ~ 488483 (-) True G378414
TU432687 other downstream 326390 396258 ~ 396755 (-) True G378509
TU432596 other downstream 356154 360910 ~ 366991 (-) True CI01000186_00360860_00361637
TU432581 other downstream 475061 245373 ~ 248084 (-) True CI01000186_00240507_00248051
TU432571 other downstream 499381 217476 ~ 217536 (-) True G378411

Expression Profile