RNA id: CI01000186_00956103_00957823.mRNA


Basic Information

Item Value
RNA id CI01000186_00956103_00957823.mRNA
length 958
RNA type mRNA
GC content 0.47
exon number 3
gene id CI01000186_00956103_00957823
representative True

Chromosome Information

Item Value
chromosome id CI01000186
NCBI id null
chromosome length 966831
location 956103 ~ 957823 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GAATCTGGCTGCTTCACGATCGCCGTCACCAGCACCGCGCACGGGGCACACAGATCTCGTTCAGTCAAAAGTGCTGTGCCAACTCTGTGCCATAACACCAATGTGCAGGCTGCCAAGGCAACTGCAAAGGGCTGCAAATATAAATGGAAAGATTTAAGCATTGACTCTTCAAATGGATACACTGTGGACTTCTCTGTGTACACAGGAAAGAACAACTTTCCCACAGGCCATGGACTGTCATATGATGCTGTGACTTCTCTTTTGGACCATACATTTTTGGGTTCTGGGTACCATGTGTACATGGACAATTTTTATACAAGTCCAAAGCTCTTGAAAGACCTGTTTGCAATGAAGTTTGGTGCATGTGGGGCTTACAGGGACAACAGGAAGGACTGCTCTCGGAATGCAGCTAATTCACTCTCTAAAAAATCTGCCAGGGGATCCATCAGATGGATTCGGGATGGACCTCTTGTATTTGTGAAGTGGATGGACACACGAGAGGTATCTGTCTGTTCTACCATCCATTCTGCTTATTCAGGAGACACTGTGCAGAGGAGGGTGAAATCACAAGATACATGGAGGACAAAGAAGTTTCCATGTCCTGCACCTGTGACTGCATACAACAAACACATGGGGGGCGTTGACTTGTCTGATCAGCTGATACAGTATTACACAACACAGCACAAAACCATGAAGTGGTACAGAAAGATCTTTCTGCACTTCTTGGATATTGCTTCCACCAACTCTTTCATTTTGCACAAAGAGCTACATGGTAACATGTCCCATAAAGAGTTTATGGAGCAACTTATCACAGAGCTCTGTGGTGTGTCACAGAAAGCAGCACCAAAACGGACCAGTACTGACCATATACCGGTTCCAGGAGCTGAGCTGACCTCTGATGGCAGGAATGTTGAGACGGTTGGTCGCCGGATCTGTGTGCATTGCAAAGCAGTGCGTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU432878 lncRNA downstream 9809 942289 ~ 946294 (-) True G378670
TU432840 lncRNA downstream 147703 808171 ~ 808400 (-) True G378634
TU432725 lncRNA downstream 153790 801075 ~ 802313 (-) True G378546
TU432726 lncRNA downstream 153790 800682 ~ 802313 (-) True G378546
TU432837 lncRNA downstream 195889 759893 ~ 760214 (-) True G378631
CI01000186_00873286_00934953.mRNA mRNA downstream 21150 873131 ~ 934953 (-) True CI01000186_00873286_00934953
CI01000186_00842940_00858572.mRNA mRNA downstream 97407 842277 ~ 858696 (-) True CI01000186_00842940_00858572
CI01000186_00815815_00829935.mRNA mRNA downstream 124801 815732 ~ 831302 (-) True CI01000186_00815815_00829935
CI01000186_00804745_00805695.mRNA mRNA downstream 150350 804644 ~ 805753 (-) True CI01000186_00804745_00805695
CI01000186_00799178_00799351.mRNA mRNA downstream 156752 798945 ~ 799351 (-) False CI01000186_00799178_00799351
TU432574 other downstream 467620 488357 ~ 488483 (-) True G378414
TU432687 other downstream 559348 396258 ~ 396755 (-) True G378509
TU432596 other downstream 589112 360910 ~ 366991 (-) True CI01000186_00360860_00361637
TU432581 other downstream 708019 245373 ~ 248084 (-) True CI01000186_00240507_00248051
TU432571 other downstream 732339 217476 ~ 217536 (-) True G378411

Expression Profile