RNA id: TU432604


Basic Information

Item Value
RNA id TU432604
length 311
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G378444
representative True

Chromosome Information

Item Value
chromosome id CI01000186
NCBI id null
chromosome length 966831
location 30676 ~ 30986 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TTATGAATAAGCTGGTGTGTTCCAAAACAATGACAAAATTCGCATTTAGGAGATACAAGCATTCAAAACTTACAGTCTCTCACTTCCGCTAAAATGGATCACGGATTTTCATGACATCACATCGCACTTCAGTTTCTCGTCAAATCTTCGGTCCAATCAAATGCTCTCTAGAATCTGAAGTCCCGCCTCCTCCTACACTCTTACAGACGCTGAAGCCTCGGCTGAAATCGGTCATTTGCTCACACATTTACTAGTTTCTACATGGTGAATGGCACATAGTGCACTATATAGAGAATAGGGAATGATTCAGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU432578 lncRNA upstream 22481 53467 ~ 53684 (-) True G378418
TU432616 lncRNA upstream 80306 111292 ~ 111496 (-) True G378453
TU432617 lncRNA upstream 81678 112664 ~ 112887 (-) True G378454
TU432618 lncRNA upstream 83382 114368 ~ 116870 (-) True G378455
TU432621 lncRNA upstream 86810 117796 ~ 118319 (-) True G378457
CI01000186_00011522_00015307.mRNA mRNA downstream 15369 11500 ~ 15307 (-) True CI01000186_00011522_00015307
CI01000186_00039365_00051758.mRNA mRNA upstream 8317 39303 ~ 52486 (-) True CI01000186_00039365_00051758
CI01000186_00087531_00090364.mRNA mRNA upstream 56507 87493 ~ 90491 (-) True CI01000186_00087531_00090364
CI01000186_00095947_00097088.mRNA mRNA upstream 64659 95645 ~ 97142 (-) True CI01000186_00095947_00097088
CI01000186_00144110_00151887.mRNA mRNA upstream 112676 143662 ~ 151887 (-) True CI01000186_00144110_00151887
CI01000186_00156270_00161766.mRNA mRNA upstream 125197 156183 ~ 161766 (-) True CI01000186_00156270_00161766
TU432622 other upstream 89696 120682 ~ 121425 (-) True G378458
TU432635 other upstream 161184 192170 ~ 193760 (-) True G378466
TU432571 other upstream 186490 217476 ~ 217536 (-) True G378411
TU432581 other upstream 214387 245373 ~ 248084 (-) True CI01000186_00240507_00248051
TU432596 other upstream 329924 360910 ~ 366991 (-) True CI01000186_00360860_00361637

Expression Profile