RNA id: TU432804



Basic Information


Item Value
RNA id TU432804
length 221
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G378616
representative True

Chromosome Information


Item Value
chromosome id CI01000186
NCBI id null
chromosome length 966831
location 727696 ~ 727916 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CCAAACTTTTCCACTAGAGACCATCCAAGCTCCATTGGTAACCACATAGGGACTCTTCCATTTCCATTTAGCCTATGGTTTGAGTGACCTGAACCATCTATTTCCATAATGTTCATACAATTTATGAAACTGAGATCCTATTCAGTAGTAGTATGGGTAAAATGGCAGTATTTGGATAGAATTCAACCTATCAAATGCAAAAAGAAATGCAAAAAGAACAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU432797 lncRNA downstream 4321 723145 ~ 723375 (-) True CI01000186_00723511_00725818
TU432791 lncRNA downstream 24031 702288 ~ 703665 (-) True G378604
TU432786 lncRNA downstream 54947 672409 ~ 672749 (-) True G378600
TU432732 lncRNA downstream 55700 667046 ~ 671996 (-) True G378552
TU432740 lncRNA downstream 72804 653803 ~ 654892 (-) True G378560
TU432828 lncRNA upstream 10424 738340 ~ 738623 (-) True G378622
TU432829 lncRNA upstream 13872 741788 ~ 742067 (-) True G378623
TU432835 lncRNA upstream 23294 751210 ~ 751413 (-) True CI01000186_00749734_00761177
TU432837 lncRNA upstream 31977 759893 ~ 760214 (-) True G378631
TU432725 lncRNA upstream 71014 801075 ~ 802313 (-) True G378546
CI01000186_00723511_00725818.mRNA mRNA downstream 1775 723326 ~ 725921 (-) False CI01000186_00723511_00725818
CI01000186_00656484_00658437.mRNA mRNA downstream 69082 656293 ~ 658614 (-) True CI01000186_00656484_00658437
CI01000186_00640328_00644798.mRNA mRNA downstream 79510 639172 ~ 648186 (-) True CI01000186_00640328_00644798
CI01000186_00588218_00590230.mRNA mRNA downstream 136892 588218 ~ 590804 (-) True CI01000186_00588218_00590230
CI01000186_00525649_00532282.mRNA mRNA downstream 195343 525556 ~ 532353 (-) True CI01000186_00525649_00532282
CI01000186_00749734_00761177.mRNA mRNA upstream 21627 749543 ~ 761177 (-) False CI01000186_00749734_00761177
CI01000186_00763236_00766749.mRNA mRNA upstream 35166 763082 ~ 766749 (-) True CI01000186_00763236_00766749
CI01000186_00768176_00773034.mRNA mRNA upstream 39765 767681 ~ 773102 (-) True CI01000186_00768176_00773034
CI01000186_00777653_00779924.mRNA mRNA upstream 48804 776720 ~ 782157 (-) True CI01000186_00777653_00779924
CI01000186_00799178_00799351.mRNA mRNA upstream 71029 798945 ~ 799351 (-) False CI01000186_00799178_00799351
TU432574 other downstream 239213 488357 ~ 488483 (-) True G378414
TU432687 other downstream 330941 396258 ~ 396755 (-) True G378509
TU432596 other downstream 360705 360910 ~ 366991 (-) True CI01000186_00360860_00361637
TU432581 other downstream 479612 245373 ~ 248084 (-) True CI01000186_00240507_00248051
TU432571 other downstream 503932 217476 ~ 217536 (-) True G378411

Expression Profile