RNA id: TU432829


Basic Information

Item Value
RNA id TU432829
length 280
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G378623
representative True

Chromosome Information

Item Value
chromosome id CI01000186
NCBI id null
chromosome length 966831
location 741788 ~ 742067 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATTCAATTATTAATCCAAACTCAATTTTGCTTCGGTTGTTTAATGACAAAATTCATTTCAAATTTAAGTTTCAAACCGTTTACTTTCATAAATGACTGTCTTAATCTGTGCTGAACCTGTTTCTGTTTGTTCTCCATGTGTGTGTTTGATGATTCAGTGTCAGTGAAGGAGGGAGATTCAATCACTCTCGACTCTGATCTTACTGAAATGAAGGATGATGATGAGATTCAGTGGAGGTTTGGAGATGATGAAAAAACTTTAATTGCTGAAATTAATAAAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU432828 lncRNA downstream 3165 738340 ~ 738623 (-) True G378622
TU432804 lncRNA downstream 13872 727696 ~ 727916 (-) True G378616
TU432797 lncRNA downstream 18413 723145 ~ 723375 (-) True CI01000186_00723511_00725818
TU432791 lncRNA downstream 38123 702288 ~ 703665 (-) True G378604
TU432786 lncRNA downstream 69039 672409 ~ 672749 (-) True G378600
TU432835 lncRNA upstream 9143 751210 ~ 751413 (-) True CI01000186_00749734_00761177
TU432837 lncRNA upstream 17826 759893 ~ 760214 (-) True G378631
TU432725 lncRNA upstream 56863 801075 ~ 802313 (-) True G378546
TU432726 lncRNA upstream 56863 800682 ~ 802313 (-) True G378546
TU432840 lncRNA upstream 66104 808171 ~ 808400 (-) True G378634
CI01000186_00723511_00725818.mRNA mRNA downstream 15867 723326 ~ 725921 (-) False CI01000186_00723511_00725818
CI01000186_00656484_00658437.mRNA mRNA downstream 83174 656293 ~ 658614 (-) True CI01000186_00656484_00658437
CI01000186_00640328_00644798.mRNA mRNA downstream 93602 639172 ~ 648186 (-) True CI01000186_00640328_00644798
CI01000186_00588218_00590230.mRNA mRNA downstream 150984 588218 ~ 590804 (-) True CI01000186_00588218_00590230
CI01000186_00525649_00532282.mRNA mRNA downstream 209435 525556 ~ 532353 (-) True CI01000186_00525649_00532282
CI01000186_00749734_00761177.mRNA mRNA upstream 7476 749543 ~ 761177 (-) False CI01000186_00749734_00761177
CI01000186_00763236_00766749.mRNA mRNA upstream 21015 763082 ~ 766749 (-) True CI01000186_00763236_00766749
CI01000186_00768176_00773034.mRNA mRNA upstream 25614 767681 ~ 773102 (-) True CI01000186_00768176_00773034
CI01000186_00777653_00779924.mRNA mRNA upstream 34653 776720 ~ 782157 (-) True CI01000186_00777653_00779924
CI01000186_00799178_00799351.mRNA mRNA upstream 56878 798945 ~ 799351 (-) False CI01000186_00799178_00799351
TU432574 other downstream 253305 488357 ~ 488483 (-) True G378414
TU432687 other downstream 345033 396258 ~ 396755 (-) True G378509
TU432596 other downstream 374797 360910 ~ 366991 (-) True CI01000186_00360860_00361637
TU432581 other downstream 493704 245373 ~ 248084 (-) True CI01000186_00240507_00248051
TU432571 other downstream 518024 217476 ~ 217536 (-) True G378411

Expression Profile