RNA id: TU439535


Basic Information

Item Value
RNA id TU439535
length 345
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G384331
representative True

Chromosome Information

Item Value
chromosome id CI01000192
NCBI id null
chromosome length 382550
location 326647 ~ 326991 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GCTATGACAGCTTCAACTCTTCTGGGAAGGCTGTCCACAAGGTTTAGGAGTGTGTTTATGGGAATTTTTGACCATTCTTCTAGAAGCACATTTGTGAGGTCAGGCAGTGATGTTGACGAGAAGGCCTGGCTCACAGTCTCCGCTCTAATTCATCCCAAAGGTGTTCTATCGGGTTGAGGTCAGGACTCTGTGCAGGCCAGTCAAGTTCCTCCACACCAAACTCGCTCATCCATGTCTTTATGGACCTTGCTTTGTGCACCTGTGCGCAGTCATGTTGGAACAGGAAGGGGCCATCCCCAAACTGTTCCCACAAAGTTGGGAGCATGAAATTGCAGTCAGGCAAGT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU439533 lncRNA downstream 948 325475 ~ 325699 (-) True G384329
TU439488 lncRNA downstream 12204 312318 ~ 314443 (-) True G384286
TU439477 lncRNA downstream 38865 286252 ~ 287782 (-) True G384279
TU439487 lncRNA downstream 104887 121263 ~ 221760 (-) True G384285
TU439485 lncRNA downstream 131192 119718 ~ 195455 (-) True G384283
CI01000192_00315657_00323729.mRNA mRNA downstream 1458 315573 ~ 325189 (-) True CI01000192_00315657_00323729
CI01000192_00252038_00254509.mRNA mRNA downstream 72138 250552 ~ 254509 (-) True CI01000192_00252038_00254509
CI01000192_00169090_00206672.mRNA mRNA downstream 119975 168969 ~ 206672 (-) True CI01000192_00169090_00206672
CI01000192_00124135_00167418.mRNA mRNA downstream 158818 123577 ~ 167829 (-) True CI01000192_00124135_00167418
CI01000192_00116033_00116872.mRNA mRNA downstream 209775 115839 ~ 116872 (-) True CI01000192_00116033_00116872
CI01000192_00345708_00354498.mRNA mRNA upstream 18272 345263 ~ 356428 (-) False CI01000192_00345708_00354498
TU439471 other upstream 29138 356578 ~ 357426 (-) True G384276

Expression Profile