RNA id: TCONS_00018661


Basic Information

Item Value
RNA id TCONS_00018661
length 115
RNA type rRNA
GC content 0.57
exon number 1
gene id XLOC_009503
representative True

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 42528790 ~ 42528904 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GCCGGCAGCGAGCTCtgtgcaactctcacatggttgcccactgaagctaagcagggctgcacccggtcagtacctggatgggagactccATGGGAAaagtaggttgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000183968

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00019246 lncRNA downstream 303030 42219583 ~ 42225760 (-) True XLOC_009501
TCONS_00019245 lncRNA downstream 303053 42219583 ~ 42225737 (-) False XLOC_009501
TCONS_00019244 lncRNA downstream 303058 42219583 ~ 42225732 (-) False XLOC_009501
TCONS_00019243 lncRNA downstream 303058 42219583 ~ 42225732 (-) False XLOC_009501
TCONS_00019242 lncRNA downstream 303120 42219583 ~ 42225670 (-) False XLOC_009501
TCONS_00019247 lncRNA upstream 22519 42551423 ~ 42557997 (-) True XLOC_009504
TCONS_00018669 lncRNA upstream 545019 43073923 ~ 43119191 (-) True XLOC_009509
TCONS_00019248 lncRNA upstream 644238 43173142 ~ 43187543 (-) True XLOC_009511
TCONS_00019249 lncRNA upstream 981646 43510550 ~ 43512072 (-) True XLOC_009515
TCONS_00019250 lncRNA upstream 1114940 43643844 ~ 43650523 (-) True XLOC_009517
TCONS_00018659 mRNA downstream 244960 42264891 ~ 42283830 (-) False XLOC_009502
TCONS_00018658 mRNA downstream 321900 42163356 ~ 42206890 (-) True XLOC_009500
TCONS_00018654 mRNA downstream 480768 42043102 ~ 42048022 (-) True XLOC_009493
TCONS_00018653 mRNA downstream 489598 41945310 ~ 42039192 (-) True XLOC_009492
TCONS_00018652 mRNA downstream 721419 41767675 ~ 41807371 (-) True XLOC_009491
TCONS_00018662 mRNA upstream 164551 42693455 ~ 42720384 (-) False XLOC_009505
TCONS_00018663 mRNA upstream 180205 42709109 ~ 42719796 (-) True XLOC_009505
TCONS_00018664 mRNA upstream 194222 42723126 ~ 42736433 (-) True XLOC_009506
TCONS_00018666 mRNA upstream 212368 42741272 ~ 42760110 (-) False XLOC_009508
TCONS_00018667 mRNA upstream 215557 42744461 ~ 42759005 (-) False XLOC_009508
TCONS_00018660 other downstream 244975 42277673 ~ 42283815 (-) True XLOC_009502
TCONS_00018633 other downstream 985350 41529260 ~ 41543440 (-) True XLOC_009482
TCONS_00018622 other downstream 1132717 41393401 ~ 41396073 (-) True XLOC_009478
TCONS_00018590 other downstream 2459663 40069011 ~ 40069127 (-) True XLOC_009467
TCONS_00018535 other downstream 4799624 37727834 ~ 37729166 (-) True XLOC_009432
TCONS_00018665 other upstream 199566 42728470 ~ 42728586 (-) True XLOC_009507
TCONS_00018678 other upstream 1122742 43651646 ~ 43651761 (-) True XLOC_009518
TCONS_00018686 other upstream 1488529 44017433 ~ 44017563 (-) True XLOC_009524
TCONS_00018697 other upstream 2221610 44750514 ~ 44750630 (-) True XLOC_009536