RNA id: TCONS_00018665


Basic Information

Item Value
RNA id TCONS_00018665
length 117
RNA type rRNA
GC content 0.50
exon number 1
gene id XLOC_009507
representative True

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 42728470 ~ 42728586 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

agccacagccatatcaccctgcattCCAAGACCGTtttctcactgaagctaagcagagctgagcctggtcagtacctggataggagaccacatgggaaaattaggttgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000182061

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00019247 lncRNA downstream 170473 42551423 ~ 42557997 (-) True XLOC_009504
TCONS_00019246 lncRNA downstream 502710 42219583 ~ 42225760 (-) True XLOC_009501
TCONS_00019245 lncRNA downstream 502733 42219583 ~ 42225737 (-) False XLOC_009501
TCONS_00019244 lncRNA downstream 502738 42219583 ~ 42225732 (-) False XLOC_009501
TCONS_00019243 lncRNA downstream 502738 42219583 ~ 42225732 (-) False XLOC_009501
TCONS_00018669 lncRNA upstream 345337 43073923 ~ 43119191 (-) True XLOC_009509
TCONS_00019248 lncRNA upstream 444556 43173142 ~ 43187543 (-) True XLOC_009511
TCONS_00019249 lncRNA upstream 781964 43510550 ~ 43512072 (-) True XLOC_009515
TCONS_00019250 lncRNA upstream 915258 43643844 ~ 43650523 (-) True XLOC_009517
TCONS_00018845 lncRNA upstream 1270944 43999530 ~ 44020074 (-) False XLOC_009523
TCONS_00018662 mRNA downstream 8086 42693455 ~ 42720384 (-) False XLOC_009505
TCONS_00018663 mRNA downstream 8674 42709109 ~ 42719796 (-) True XLOC_009505
TCONS_00018659 mRNA downstream 444640 42264891 ~ 42283830 (-) False XLOC_009502
TCONS_00018658 mRNA downstream 521580 42163356 ~ 42206890 (-) True XLOC_009500
TCONS_00018654 mRNA downstream 680448 42043102 ~ 42048022 (-) True XLOC_009493
TCONS_00018666 mRNA upstream 12686 42741272 ~ 42760110 (-) False XLOC_009508
TCONS_00018667 mRNA upstream 15875 42744461 ~ 42759005 (-) False XLOC_009508
TCONS_00018668 mRNA upstream 20701 42749287 ~ 42759005 (-) True XLOC_009508
TCONS_00018670 mRNA upstream 426158 43154744 ~ 43164591 (-) True XLOC_009510
TCONS_00018671 mRNA upstream 480007 43208593 ~ 43238220 (-) False XLOC_009512
TCONS_00018661 other downstream 199566 42528790 ~ 42528904 (-) True XLOC_009503
TCONS_00018660 other downstream 444655 42277673 ~ 42283815 (-) True XLOC_009502
TCONS_00018633 other downstream 1185030 41529260 ~ 41543440 (-) True XLOC_009482
TCONS_00018622 other downstream 1332397 41393401 ~ 41396073 (-) True XLOC_009478
TCONS_00018590 other downstream 2659343 40069011 ~ 40069127 (-) True XLOC_009467
TCONS_00018678 other upstream 923060 43651646 ~ 43651761 (-) True XLOC_009518
TCONS_00018686 other upstream 1288847 44017433 ~ 44017563 (-) True XLOC_009524
TCONS_00018697 other upstream 2021928 44750514 ~ 44750630 (-) True XLOC_009536

Expression Profile

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