RNA id: CI01000201_00066137_00066334.mRNA


Basic Information

Item Value
RNA id CI01000201_00066137_00066334.mRNA
length 2645
RNA type mRNA
GC content 0.38
exon number 1
gene id CI01000201_00066137_00066334
representative True

Chromosome Information

Item Value
chromosome id CI01000201
NCBI id null
chromosome length 704500
location 63803 ~ 66447 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TTATAAAAAGCTGTACATTTCTTTTTGACGCCACTGAAGATCATGTGTGTAATACAATAAAAATCCTTTGGATATGTGCTTAACAGCTTCTGCGTTTCACAGTCATTCTCATCTCGTCTTTCTCAATGAAATGAAGCATTTGTACAGACATCATGGATTATTCGAAGGATTCGTCTCTTGGATTGAAGACGAGATCGTCAATAATGCAGCTTCACTAATCACAGCTTCATATTCTTTGATATGATTCACAGAAAATCATACCTTTCTTTCTATAAATATGAAGGGACTTTCATAAAAGAATAAGCTGTTCTGAACATGAAAACGTGGTGAAAAGAATGTTTTCATCTTTAAGCTGTTATTAAAACGAATCCTGAATCCTGATTGGATGAGCCTGTTGAAGTAGTTGTCAGTCAAATGCAGATGTTTTAATGCAAGTTTCTGTAGTCGCAGTAATAAACTACAGTACTTGGTGGAAGAACTGATTACTCCAATTATTAATAACTATCAACTGAACATTGGTGCATTTGATCACACTGGCGTTTTATAAAAGCACACAAGGTTGTGAAGTACAGTGATTAAAGTCTAAATGAGATGCTGTTTTAATTAAACCACAACGAAAGACGGTTTAGAGGCGAGTTATTACTTTTTGATGAAAGATTACTAAGACAAACATTTACTTGAGAGAACCTGAATGATGAATCATTCACAATAAGACCATGTATGTAAGTAAACGAGTCGATTGTGATGATGAATAGAGGTTTAGGTCGTATTGGTTAATTAAGTGGCAGTACAAAAACAGACTCTTTCTGCTCGTCACTGGAAACATCTTGAGTTTATGTGAACAGAAAATAACTACAGTGACTGATCCAGATGAGAACTTAAACAAATGACAAACATCAGAAGCACTCTTAGAAGAAAAGGTTCTATTTAGAACCTTAAAAGGTTCCGTCAGGCGTTTCATATAAGGGTTCCCATCACGCACTCCGAAAAATAAAGGTTCTTTATTGGCATCGATGGTTCCATCCCTGGAAACTTTCCATTGCACAAAAGGTTCTTTAAGTGGAAAAAGGTTTTTGAGATTATCAAAAGAACTAAGAATTTTTAAGAACTGTTCAGTGAAACGTTCTTTGTGGATATAAAAATGGTTCTTCTATTTCATCTATCAAAACCCCCTTTTTGCAACCTTCATGTTTAAGAGTGTGGGATCATCTTATGGATTTAGTGGTAACATTTTAATTAAAGCCTTTCATGCATTATAAAACTATTTTTAATGCATTAATTATGTCTTGTAATGCACCTTATTATGCATTGTATGATCTCATGACTAACTGTAACCACAGTTATTATGCATTATATTACCTTTAGAAAGTATAATGCATCAGGGTGCCACTTTCAAAATGCGGGCATTTGAATGCGCGTTTTACTTTCGATTTTGCAATCGCATGTACTCTGTGAATAGGGAGCGGCAGTGCTGAGCACGCATTCCACAAGATAAGTCATTTGTCCGACGCTTCAGGCTCTGTTGTGCAACGAATCCTCTGCCATGGTCTTGTCAGTCATCTCGTCACTCTCGTCACGTGATCAGTGAACTCTGATTCCTGCTGCACTACGTACAGAGCTGCAGCTCGTGTTGGAGGAGCTGGATGGGATTGAAGCGACCGTTATTCAAATGAATTAAACTAAAAAGCAAAATGACAGTGGAGGCGTAATGTAAACGTAGCGGTGGCATATTCTATCCTAATTTCACCTTCACACTTCGTCATGACAGATTTTCATATCTCGTCATATTTTAATCTCATGAAATCTTGTCACACCCATAGTAAATACAAATATTTATGTAAAGATATAATGCATTATAAATACTTTTATAATGCATTATACATAAAGGCTTTAAGTAAAGTGTTACAGTATTATGCAATCGTTTAAGACATTTCTCCTTATATAGAACCTTTCTGGCATAAAGTGTTCTTTAAAACTGATTAAAGAACCCTAGAGTTCTATATAAAACCCACTGAACCTTTCCTTCTAAGAGTGTGGGACGCTCCGGACACAGTTGCAGCAGATTAAATCGGAAGCAATGACAGAAACACACTCACAGTGTGGGAAGGACGTTCACAGCGATCCTTCCAAGAGCGTCGAGCCCTTCAGAAGAACAACAAATAATCATGACGTGACTCTTCATTAGTCACAGTTCTTCGGTATGAGATTGTCAACACTTGGAAGGAATCGACTGACTCAGAGTGTAATGAATGGTTCATTTGTGACGGCATCTGAGCAGCTTCCACCTTCAGTTGAACCAGTTTACAAAAGTGAAGCAACCACATTGTGTGTCATATGAGAGAAACAGCGAGTCCCGGAGGCGCAGCAGATCGCAGGTCTTTCTCCAGAGTCCAGCCTGAAGATCTTGATGGAGAGAAGCTGCTGAGGACCGAATCTGATGACCTTCAGACACGACACATCCACCAACTCCTTCCAGCTCTGGAGAAACAGCAGCAGCGGCACCTTCAGCTGGAGTCTGGAGATGAAACATGACCTTCATCAGTCTCATGCTGCATTATGACTGTTTACCACATAAGAGAATATAAATATATTATTATTATTATTTATTGTTATTGTTATTATTATTCACACATGGGCTCATCATA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU443623 lncRNA downstream 77637 144084 ~ 144791 (+) True G387615
TU443663 lncRNA downstream 88393 154840 ~ 155726 (+) True G387650
TU443767 lncRNA downstream 168444 234891 ~ 268792 (+) False G387739
TU443772 lncRNA downstream 168444 234891 ~ 268792 (+) False G387739
TU443774 lncRNA downstream 168444 234891 ~ 268792 (+) True G387739
CI01000201_00043840_00048171.mRNA mRNA upstream 15223 43780 ~ 48580 (+) True CI01000201_00043840_00048171
CI01000201_00098073_00121392.mRNA mRNA downstream 31570 98017 ~ 121794 (+) True CI01000201_00098073_00121392
CI01000201_00124616_00139299.mRNA mRNA downstream 58169 124616 ~ 139527 (+) True CI01000201_00124616_00139299
CI01000201_00254354_00285896.mRNA mRNA downstream 187668 254115 ~ 286062 (+) True CI01000201_00254354_00285896
CI01000201_00394321_00396791.mRNA mRNA downstream 327705 394152 ~ 396995 (+) True CI01000201_00394321_00396791
CI01000201_00421647_00426906.mRNA mRNA downstream 354139 420586 ~ 426906 (+) True CI01000201_00421647_00426906

Expression Profile