RNA id: CI01000201_00254354_00285896.mRNA


Basic Information

Item Value
RNA id CI01000201_00254354_00285896.mRNA
length 1626
RNA type mRNA
GC content 0.49
exon number 5
gene id CI01000201_00254354_00285896
representative True

Chromosome Information

Item Value
chromosome id CI01000201
NCBI id null
chromosome length 704500
location 254115 ~ 286062 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CCATAAAACGGCGCGCATATTCATCGATTCCTAAAAGGCAGGGAAAAAACGTCCTTGCATCAGTGAAAACCGCGCAGATAATCCCGCACACAATAATCTCGATGCTCTGATCGATTCCAGCGTCTTGATGTGTGTCTTGCTCGATTCAGCTCTATTGGGTTTGTGTCGAATGAGAACCTCAGCGGCTGCGGACTGACCGACTGCATTAAACCTCACCGAGAGATTTACATGAGAGAAAAATGGAGAACTTCAGAAATGACAGGACACGGAGCCTTCAGAAAAGTGTTGTAAATGGGGGAGGAGAGAGTCAATCAGCATTAGGGGGCGTGTCCACTCATGATAGGGGAGGAGAGAGTCAATCAGCATTAGGGGGCGTGTCCACTCATGATAGGGGAGGAGAGAGTCAATCAGCATTAGGGGGCGTGTCCACTCATGATAGGGGAGGAGAGAGTCAATCAGCATTAGGGGGCGTGTCCACTCATGATAGGGGAGGAGAGAGTCAATCAGCATTAGGGGGCGTGTCCACTCATGATAGGGGAGGAGAGAGTCAATCAGCATTAGGGGGCGTGTCCACTCATGATAGGGGAGGAGAGAGTCAATCAGCATTAGGGGGCGTGTCCACTCATGATAGGGGAGGAGAGAGTCAATCAGCATTAGGGGGCGTGTCCACTCATGATAGGGGAGGAGAGAGTCAATCAGCATTAGGGGGCGTGTCCACTCATGATAGGGGAGGAGAGAGTCAATCAGCATTAGGGGGCGTGTCCACTCATGATAGGGGAGGAGAGAGTCAATCAGCATTAGGGGGCGTGTCCACTCATGATAGGGGAGGAGAGAGAGTGAGCCAATCAACAGTAGGGGGCGTGTCCACTCATGATGGGGGAGGAGAGAGAGTGAGCCAATCAGCATTAGAGGGCGTGTCTACTCATGATGGGGGAGGCGAGAGCCAATCAGTATTAGAGGGAGAAGATGAGAATAAGCAGCACTCAAGCAACTTATTTCACACGAGGAAGCCGAATGCTTCTTATGTTCCACAAGACAAAATATATAGTCTGGATAAAGCCTATCAGATTTCCCTGGAGAGAGACTACTGGAATATTCCTATATTGGATTATCTGCAGGAGCCGGAGAAGCTACTGCAGCGAGTGGCCGTATCCATCTTCTCGAGAAGAGCTCTTGATTGTCACATCCAGTTATTTAAATTGCCTTCGAGAGGCCAGGACCTGGAATGGAACAATATCCTTTGGCTTTGCTTCCCTGGCTCCGGCGCTTCTCATTTATTTTTATGCGGAGCTGAGACAGCGCTTTGGCACCTTTCCACCGTGAAGGTAGTCCAGAGGAGCCCGACTCCTGAAGCCGTCGAGAATGAAGAAGTTTCGCGTGAGATTAGACAGCGAGCGGCGCTGGGATGGAGCCAGGCTGATAATGGAGCGATTGGCTGCAGAACAGACCTGAAAAACTGAGCTCAATGTGATTCTGGCAGCAACTCAATATTTATTATCCATTAGACGATATCCAGTATCACCATATTTATGTATCTGTCCTGAAATGGCTTAAAAGAGTGCTTTTTTCCAGTCCGAGGGACATTAATCATTGTCATTCATATACACTAATATAACAATCACATTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU443663 lncRNA upstream 98389 154840 ~ 155726 (+) True G387650
TU443623 lncRNA upstream 109324 144084 ~ 144791 (+) True G387615
TU443637 lncRNA upstream 150066 47560 ~ 104049 (+) True G387629
TU443861 lncRNA downstream 36760 322822 ~ 354650 (+) True G387804
TU443865 lncRNA downstream 54125 340187 ~ 385102 (+) True G387807
TU443907 lncRNA downstream 120151 406213 ~ 406445 (+) True G387838
TU443923 lncRNA downstream 203343 489405 ~ 489702 (+) True G387848
TU443924 lncRNA downstream 212724 498786 ~ 527371 (+) True G387849
CI01000201_00124616_00139299.mRNA mRNA upstream 114588 124616 ~ 139527 (+) True CI01000201_00124616_00139299
CI01000201_00098073_00121392.mRNA mRNA upstream 132321 98017 ~ 121794 (+) True CI01000201_00098073_00121392
CI01000201_00066137_00066334.mRNA mRNA upstream 187668 63803 ~ 66447 (+) True CI01000201_00066137_00066334
CI01000201_00043840_00048171.mRNA mRNA upstream 205535 43780 ~ 48580 (+) True CI01000201_00043840_00048171
CI01000201_00394321_00396791.mRNA mRNA downstream 108090 394152 ~ 396995 (+) True CI01000201_00394321_00396791
CI01000201_00421647_00426906.mRNA mRNA downstream 134524 420586 ~ 426906 (+) True CI01000201_00421647_00426906
CI01000201_00473896_00474283.mRNA mRNA downstream 187834 473896 ~ 474436 (+) True CI01000201_00473896_00474283
CI01000201_00547876_00556142.mRNA mRNA downstream 261814 547876 ~ 556255 (+) True CI01000201_00547876_00556142
CI01000201_00572895_00575129.mRNA mRNA downstream 286657 572719 ~ 575704 (+) True CI01000201_00572895_00575129

Expression Profile