RNA id: TU443937



Basic Information


Item Value
RNA id TU443937
length 709
lncRNA type inter_gene
GC content 0.40
exon number 2
gene id G387862
representative True

Chromosome Information


Item Value
chromosome id CI01000201
NCBI id null
chromosome length 704500
location 588465 ~ 589474 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GCAGCAGTATCAGGAAGTCTAATGTGTTTTTCTGTCATATATAGATGATATTTAAGACACTAATGAGCCTCTGGAGAATGATTAAACATGAAAAAGACTGTCCTCAGAGGAGAGAACACACAGGAGATCTCCTCTGACTTGTGAGGGATTCAAAGTACATCTGCTGATTATTTGCATGAGCTGTCTGCATTGTTTTTAGCACCCAATTCACTAAAGAAATTATGCAAATCAGGATTCTGAGACAAAGTTGGTACATAAATGAGACGTAGCTATAAGACATCGGCTCTTTTAAACTCAATGATCTGCCATTAATGAGCTGGTGAGCCGTGCTGAATGACTGACTGCAGGATAAACGTTGGTTGGTGACAGCGATAAAAACACAATGCTTGTCGTTGTCTTTGACTATAAAAGGAGAGGAGGCCGTAAGGGTAGAGAGTTATTTCGAAAGCTCGACACGACCACATCCTGCTCTGAGTGGGAGTTTTGACAGCCGCTCACTGCCATGCTGACCTGACAGCAGACGAGCAACCTCACTGGATTGACTAATTTCACAGTAAAACTGCTTTAAAGATGTTTAGAATGAAAGAAATGCAAAAGTGCATGTGATACTTTAGTAGTAGTATTTTCAGCAAATGTGCATTAAATTAATTACCCCAGTAGTAAAGTGTGTTTTTTTGGGTCAAGTTTTAAGCATAAACCTCACTAACAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU443924 lncRNA upstream 61094 498786 ~ 527371 (+) True G387849
TU443923 lncRNA upstream 98763 489405 ~ 489702 (+) True G387848
TU443907 lncRNA upstream 182020 406213 ~ 406445 (+) True G387838
TU443865 lncRNA upstream 203363 340187 ~ 385102 (+) True G387807
TU443861 lncRNA upstream 233815 322822 ~ 354650 (+) True G387804
TU443896 lncRNA downstream 25457 614931 ~ 616868 (+) True G387827
TU443951 lncRNA downstream 34301 623775 ~ 623986 (+) True G387876
TU443903 lncRNA downstream 36474 625948 ~ 629376 (+) True G387834
TU443932 lncRNA downstream 55071 644545 ~ 645170 (+) True G387857
TU443956 lncRNA downstream 72696 662170 ~ 663023 (+) True G387881
CI01000201_00576577_00577506.mRNA mRNA upstream 9564 576577 ~ 578901 (+) True CI01000201_00576577_00577506
CI01000201_00572895_00575129.mRNA mRNA upstream 12761 572719 ~ 575704 (+) True CI01000201_00572895_00575129
CI01000201_00547876_00556142.mRNA mRNA upstream 32210 547876 ~ 556255 (+) True CI01000201_00547876_00556142
CI01000201_00473896_00474283.mRNA mRNA upstream 114029 473896 ~ 474436 (+) True CI01000201_00473896_00474283
CI01000201_00421647_00426906.mRNA mRNA upstream 161559 420586 ~ 426906 (+) True CI01000201_00421647_00426906

Expression Profile