RNA id: TU443951


Basic Information

Item Value
RNA id TU443951
length 212
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G387876
representative True

Chromosome Information

Item Value
chromosome id CI01000201
NCBI id null
chromosome length 704500
location 623775 ~ 623986 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TTTCAATATATATATGGTAACAATGTGGTATTTTAAAGGTGAAGTGAGCTTTTCAGTGGTACGAATAGTTTCCCGTATCTAGAGTCACTGTAAATATGCAGAATCACTGCATATTTACAGTGTTTATCTTCAGGTTTATTTCCTTATAAAAGTGAAACACTGATTCTGTCGTGTCAGAGCAACAACATGTCATTGTGTTATTTTTAGCAATT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU443896 lncRNA upstream 6907 614931 ~ 616868 (+) True G387827
TU443885 lncRNA upstream 10390 522909 ~ 613385 (+) True G387819
TU443937 lncRNA upstream 34301 588465 ~ 589474 (+) True G387862
TU443924 lncRNA upstream 96404 498786 ~ 527371 (+) True G387849
TU443923 lncRNA upstream 134073 489405 ~ 489702 (+) True G387848
TU443903 lncRNA downstream 1962 625948 ~ 629376 (+) True G387834
TU443932 lncRNA downstream 20559 644545 ~ 645170 (+) True G387857
TU443956 lncRNA downstream 38184 662170 ~ 663023 (+) True G387881
CI01000201_00576577_00577506.mRNA mRNA upstream 44874 576577 ~ 578901 (+) True CI01000201_00576577_00577506
CI01000201_00572895_00575129.mRNA mRNA upstream 48071 572719 ~ 575704 (+) True CI01000201_00572895_00575129
CI01000201_00547876_00556142.mRNA mRNA upstream 67520 547876 ~ 556255 (+) True CI01000201_00547876_00556142
CI01000201_00473896_00474283.mRNA mRNA upstream 149339 473896 ~ 474436 (+) True CI01000201_00473896_00474283
CI01000201_00421647_00426906.mRNA mRNA upstream 196869 420586 ~ 426906 (+) True CI01000201_00421647_00426906

Expression Profile