RNA id: TU451881


Basic Information

Item Value
RNA id TU451881
length 153
RNA type TUCP
GC content 0.40
exon number 1
gene id CI01000222_00695056_00696916
representative True

Chromosome Information

Item Value
chromosome id CI01000222
NCBI id null
chromosome length 845821
location 695056 ~ 697046 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTTGAGTTTGAACCAATACATCTTGATCCCTTTCTTTGAAATGTCTGGTAAAATATCAGCCTCTAAAGAAGCTGATCCAAATTCAATTGTCAGGTCACCCAATAAATTAGTCAACGGATGTCCTTCAGATTCTGACTTAAGGATAAGAAAATCTTATGTCATGTCATACAACAATGAAACCAAGAACGCTGAATGGGTGTATGAGATACTGAACAAAGACACTCTGAAGGTCAATTGTAAGGCGCACGGGAGCTTTGGAAGGAATGAATTTGTGGACAAAGACTATGAACAAGGTCATCTTGCTGCGGCTGCCAATCACAGGTGGTGTCAGGAAGCCTATCATGACACTTTTTTGATCAGCAACATGGCACCACAGAATAAAGGCTTAAACAAAGGTAATTGGAAAACTATTGAGAGTTACTGTCGATACAGAGCTATGAATGATGAAGTCTGTAATGTCCATGTGTACTCTGGACCACTTTACCTAAAAGAAAAAAAAAATAAAGAGGGTACTGAGGTGGAGGAATTTTATGATCGTGCTGACCTCAGTACACTGGAGCGGAAGGGAGGGAAAGTAGTGCCAACTCACTTGTTTAAGGTGATAATTGTGGAGAATGAGGATGGGACAGTAGAAGAGCCGGAATGCTATGTGATGCTCAAAGTGAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU451884 lncRNA upstream 313 573474 ~ 583971 (+) True G394486
TU451892 lncRNA upstream 98065 478461 ~ 486219 (+) True G394492
TU451870 lncRNA upstream 124808 458218 ~ 459476 (+) True G394478
TU451869 lncRNA upstream 126237 457834 ~ 458047 (+) True G394477
TU451850 lncRNA upstream 132592 449756 ~ 451692 (+) True G394459
TU451933 lncRNA downstream 2925 699784 ~ 707290 (+) True G394521
TU451956 lncRNA downstream 18677 715536 ~ 715762 (+) True G394544
TU451977 lncRNA downstream 61146 758005 ~ 760127 (+) True G394561
CI01000222_00531504_00560379.mRNA mRNA upstream 23570 531155 ~ 560714 (+) True CI01000222_00531504_00560379
CI01000222_00328639_00330158.mRNA mRNA upstream 253910 328639 ~ 330374 (+) True CI01000222_00328639_00330158
CI01000222_00315211_00317790.mRNA mRNA upstream 266198 315211 ~ 318086 (+) False CI01000222_00315211_00317790
CI01000222_00255680_00256841.mRNA mRNA upstream 327438 255612 ~ 256846 (+) True CI01000222_00255680_00256841
CI01000222_00232414_00239331.mRNA mRNA upstream 344874 232198 ~ 239410 (+) True CI01000222_00232414_00239331
CI01000222_00772007_00787456.mRNA mRNA downstream 75003 771862 ~ 787590 (+) True CI01000222_00772007_00787456
TU451875 other upstream 121818 461989 ~ 462466 (+) True G394482
TU451654 other upstream 435374 132044 ~ 148910 (+) True G394294
TU451651 other upstream 472161 109188 ~ 112123 (+) False G394293
TU451667 other upstream 541437 31433 ~ 42847 (+) True G394303
TU451975 other downstream 53488 750347 ~ 752670 (+) True G394559

Expression Profile