RNA id: TU453001


Basic Information

Item Value
RNA id TU453001
length 549
lncRNA type antisense_over
GC content 0.42
exon number 3
gene id G395340
representative False

Chromosome Information

Item Value
chromosome id CI01000225
NCBI id null
chromosome length 750214
location 462156 ~ 522868 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TCCATTCAGATTCCAGTGAAACCAAACGGTGTCCGTTATGATTGTCAATCATACACAGGTAACAAATACATTGACGATCATCCTGACAGTAAATCTCCAGAAGTTTCCCATGACTGAGGCAGATGTTCTCCTGAATGTTTCTGGAAGCTTCGACTAGTTTGTGCTTCATAAACGCAGGAGATTCATAGTGAAGCTGCAGGTGAGTTTGACAGAAGGAGGCCAAGCACTGCAGACAGGACTTTACAGCTCTGTTCTTCTCTGTAGTGCAAACATCACACTCCACAGCAGCCGTTTGTAGGGACGTCTTCTGCAGCGTCTCCATCATCTCAGCTATCAGAGTGTTCTTCTTCAGTAGAGGTCTCTGACTGAAGCTGTAAATAAAATGATTATTGTAACACGTTTTACAAGAAAATACTATATTTTAGCCTTTCTACTTCAAACTGTCACGTTTTTTAATGTCGCATGAAAGTTGCAATCCTACAGACATTAGTCAGGGTAGCTCCAAACTAATTTTTGACAGGAATGAAGGGAGGGATAGACGTACAGTGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU453011 lncRNA downstream 1731 460175 ~ 460425 (-) True G395347
TU453004 lncRNA downstream 7756 453247 ~ 454400 (-) True G395341
TU452963 lncRNA downstream 42505 419354 ~ 419651 (-) True G395314
TU452986 lncRNA downstream 43582 418314 ~ 418574 (-) True G395335
TU452984 lncRNA downstream 45413 416302 ~ 416743 (-) True G395333
TU452990 lncRNA upstream 1345 524213 ~ 531490 (-) True G395337
TU453020 lncRNA upstream 13984 536852 ~ 537088 (-) True G395356
TU453021 lncRNA upstream 14865 537733 ~ 538115 (-) True G395357
TU453027 lncRNA upstream 25241 548109 ~ 548339 (-) True G395363
TU453046 lncRNA upstream 118075 640943 ~ 671296 (-) True G395379
CI01000225_00425270_00431446.mRNA mRNA downstream 30710 424599 ~ 431446 (-) True CI01000225_00425270_00431446
CI01000225_00404519_00407448.mRNA mRNA downstream 53527 404375 ~ 408629 (-) True CI01000225_00404519_00407448
CI01000225_00393863_00402338.mRNA mRNA downstream 59618 393863 ~ 402538 (-) True CI01000225_00393863_00402338
CI01000225_00383340_00392393.mRNA mRNA downstream 69763 383087 ~ 392393 (-) True CI01000225_00383340_00392393
CI01000225_00195825_00204991.mRNA mRNA downstream 257165 195709 ~ 204991 (-) True CI01000225_00195825_00204991
CI01000225_00553926_00616121.mRNA mRNA upstream 31058 553926 ~ 616121 (-) True CI01000225_00553926_00616121
CI01000225_00724320_00725003.mRNA mRNA upstream 201433 724301 ~ 725325 (-) False CI01000225_00724320_00725003