RNA id: TU453021


Basic Information

Item Value
RNA id TU453021
length 383
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G395357
representative True

Chromosome Information

Item Value
chromosome id CI01000225
NCBI id null
chromosome length 750214
location 537733 ~ 538115 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CCAGAATGTGTCTGTGAAGTTTCAGCTCAAAATACCCCACAGATCATTTATTATAGCTTGTCAAATTTGCCCCTATTTGGGTGTGAGCAAAAACACGCTGTTTTGTGTGTGTCCCTTTAAATGCAAATGAGCTGCTGCTCCCGGCCCGCTTTCCAAAAGAGGGCGGAGCTTTAACAGCTCACGCTTCGGTTGCTCAACAACAACAAAGCTGGAGAATCTCACGCAGCCAAAATGACGATTGTCAGTAACGGTGTTCAGCCTTACATTGTTCAAACCGGAGTCGACACTGATGGAGAGATTCAGGAAGAAGTTACAACTTTTAGAATGAAACTGGACGTTTCTGAATGGTTAGTGGATAAATTTATGTAGTTTCTGTGGAGCTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU453020 lncRNA downstream 645 536852 ~ 537088 (-) True G395356
TU452993 lncRNA downstream 6243 510889 ~ 531490 (-) False G395337
TU452990 lncRNA downstream 6243 524213 ~ 531490 (-) True G395337
TU453002 lncRNA downstream 44332 462156 ~ 493401 (-) False G395340
TU453027 lncRNA upstream 9994 548109 ~ 548339 (-) True G395363
TU453046 lncRNA upstream 102828 640943 ~ 671296 (-) True G395379
TU453035 lncRNA upstream 111529 649644 ~ 676472 (-) False G395371
TU453038 lncRNA upstream 111695 649810 ~ 676622 (-) True G395371
TU453080 lncRNA upstream 187175 731200 ~ 731234 (-) True G395396
CI01000225_00425270_00431446.mRNA mRNA downstream 106287 424599 ~ 431446 (-) True CI01000225_00425270_00431446
CI01000225_00404519_00407448.mRNA mRNA downstream 129104 404375 ~ 408629 (-) True CI01000225_00404519_00407448
CI01000225_00393863_00402338.mRNA mRNA downstream 135195 393863 ~ 402538 (-) True CI01000225_00393863_00402338
CI01000225_00383340_00392393.mRNA mRNA downstream 145340 383087 ~ 392393 (-) True CI01000225_00383340_00392393
CI01000225_00195825_00204991.mRNA mRNA downstream 332742 195709 ~ 204991 (-) True CI01000225_00195825_00204991
CI01000225_00553926_00616121.mRNA mRNA upstream 15811 553926 ~ 616121 (-) True CI01000225_00553926_00616121
CI01000225_00724320_00725003.mRNA mRNA upstream 186186 724301 ~ 725325 (-) False CI01000225_00724320_00725003

Expression Profile