RNA id: TCONS_00019316


Basic Information

Item Value
RNA id TCONS_00019316
length 1238
RNA type mRNA
GC content 0.53
exon number 8
gene id XLOC_009621
representative False

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 2820340 ~ 2833536 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

catgagatgGGCTTTCAGAGCAGATAGATCGTCTCCACGGGCGGACTGTTATGGCGGAACCTTCATCGCGGAGAGAGGATGAAGAATGGCAGGATTTTAACGAATTTAAGGGCGGAACGGGACGGAATTTGGATGTTAGCGCGGAGGAGACGCGGCTgtcgctgctgctgctgctggacgAGCTTTCAGACGCCGAGAGCGCGCTTCAGACGGGCGCGTTCACGTCCACACACTTCGACGAGAACCTACAGCTGTGCTTTCAAGATGTGCACTCGAAAACGGACGCAGGAAATGAACTGACGTCTTTAAACGAGGAGACGACGCTAAAATGCGACGAGATCTGGAGCGCTCTGACCGATAATTATGGCCACGTTATGCCGGTGGACTGGAGTCAGTCTCGAGTGCGGTCTCTTCACCTGTCAACACTGAGTCTGGATGACCGAGCGCGGCTGGAGAGTGTGAACCTGGACGTGTCTGATGATGAGGAGCTGCGGGATCAGATGGACATGCACTCTATCATTGTGTCCTGCATCAACGAGGAGCCGCTGCTCACTGCTGAACAGGTTATCGAGGAGATCGAGGAGCTCATGCAGGAGTCACCAGAGGTGGAATCAGAGCAAAACGTTTCACACTCAGGCGTCTCCTTCATCTCTCAGAAAAGATCTCACAGCAGCCAGATCTACGAGGACCGAGTGAGGCTGATGTCCGTGCTGGAGCTGAACGATGAGCTGGAGGACGTGGAGACGGCCATTCGAGGATATTCAGAGGAGCTCATCCACCATCTGGCCACCAGGGACGAGCTGGAGTTTGAAAAGGAGGTGAAAAACAGCTTCATCTCGGTGCTCATCGACGTACAGAACCGGCAGAAGCTGCAGCGAGAGATGCTGAAGAAGAAGAGGAAAGTGAGGAGCACGTCAGGATCAGAGAGACTGCCGTCTTCTTATGTAACAACAGTCATTCCTTACGAGAGGAGAGACGGTCCACCGTCAGTCCAAGACCTTCAGATCTTTACCAAAATTTTAGAAGCCATGAGAGACGACAGCGATAAAGTCCCAAGCCTCCTCACAGATTACATCCTCAAAGTTCTCTGTCCCACCTAGAGAGAGGAGGGTCTCCTGTGGTCTGCGGTTTCACAATCGTCCCTGCAGGAGTTCGGTTCACTGTGTTCCTCAGATTGCATGACATGTTTGGCCTGATCTGCACCTCTTCTGTTCTTCTCTGCATGTTTTTCAGCACAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000192931

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00021867 lncRNA upstream 644289 2121684 ~ 2176051 (+) True XLOC_009615
TCONS_00021866 lncRNA upstream 662333 2121671 ~ 2158007 (+) False XLOC_009615
TCONS_00021865 lncRNA upstream 959180 1860384 ~ 1861160 (+) True XLOC_009614
TCONS_00021864 lncRNA upstream 1002792 1776515 ~ 1817548 (+) False XLOC_009613
TCONS_00021868 lncRNA downstream 219888 3053424 ~ 3059091 (+) True XLOC_009625
TCONS_00021672 lncRNA downstream 302622 3136158 ~ 3137243 (+) True XLOC_009627
TCONS_00021675 lncRNA downstream 313726 3147262 ~ 3149776 (+) False XLOC_009628
TCONS_00021674 lncRNA downstream 313726 3147262 ~ 3149776 (+) False XLOC_009628
TCONS_00021673 lncRNA downstream 313726 3147262 ~ 3149776 (+) False XLOC_009628
TCONS_00019313 mRNA upstream 237062 2565433 ~ 2583278 (+) False XLOC_009619
TCONS_00019312 mRNA upstream 237062 2565433 ~ 2583278 (+) True XLOC_009619
TCONS_00019311 mRNA upstream 347763 2469889 ~ 2472577 (+) True XLOC_009618
TCONS_00019310 mRNA upstream 385878 2433696 ~ 2434462 (+) True XLOC_009617
TCONS_00019307 mRNA upstream 714784 1802307 ~ 2105556 (+) False XLOC_009613
TCONS_00019318 mRNA downstream 7239 2840775 ~ 2844058 (+) False XLOC_009622
TCONS_00019319 mRNA downstream 9892 2843428 ~ 2844195 (+) True XLOC_009622
TCONS_00019320 mRNA downstream 66075 2899611 ~ 2927995 (+) False XLOC_009623
TCONS_00019321 mRNA downstream 71614 2905150 ~ 2990676 (+) True XLOC_009623
TCONS_00019322 mRNA downstream 170886 3004422 ~ 3027240 (+) True XLOC_009624
TCONS_00019314 other upstream 90851 2729373 ~ 2729489 (+) True XLOC_009620
TCONS_00019309 other upstream 536166 2284056 ~ 2284174 (+) True XLOC_009616
TCONS_00019306 other upstream 1079282 1740937 ~ 1741058 (+) True XLOC_009612
TCONS_00019299 other upstream 1599778 1220446 ~ 1220562 (+) True XLOC_009606
TCONS_00019298 other upstream 1607552 1212674 ~ 1212788 (+) True XLOC_009605
TCONS_00019326 other downstream 519965 3353501 ~ 3353617 (+) True XLOC_009631
TCONS_00019348 other downstream 1864277 4697813 ~ 4707300 (+) False XLOC_009649
TCONS_00019354 other downstream 1936843 4770379 ~ 4779952 (+) False XLOC_009652
TCONS_00019355 other downstream 1940597 4774133 ~ 4776956 (+) True XLOC_009652
TCONS_00019358 other downstream 2040828 4874364 ~ 4874481 (+) True XLOC_009654

Expression Profile

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