RNA id: TU453589


Basic Information

Item Value
RNA id TU453589
length 247
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G395793
representative True

Chromosome Information

Item Value
chromosome id CI01000228
NCBI id null
chromosome length 640563
location 513025 ~ 513271 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TTAGCGAGCATGTGAACACTTAGATCATAGATGGAAAAGACCATTTACAGCCAATAAAGGCTATTTAGTAAGGAAAAGCATGTTTTTTTGACAGTTATGGCACCACCTATTGCCCGATCTCCACCACTTTTTTTGGGTGTCCTCAGAGTGTGTCCATACATATGTGTGTTCATTTTGGTGAAAATATCTCATTTCGTTTTGGAGTTATAGACACTCATATATATGAGAGCATAAAAAATGACCCATG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU453586 lncRNA downstream 4012 508799 ~ 509013 (-) True G395790
TU453497 lncRNA downstream 40224 471235 ~ 471297 (-) True G395716
TU453501 lncRNA downstream 62290 450500 ~ 450735 (-) True G395720
TU453563 lncRNA downstream 98051 414677 ~ 414974 (-) True G395767
TU453487 lncRNA downstream 98781 412804 ~ 414244 (-) True G395706
CI01000228_00450070_00487878.mRNA mRNA downstream 25147 450052 ~ 487878 (-) False CI01000228_00450070_00487878
CI01000228_00432311_00436091.mRNA mRNA downstream 76871 432042 ~ 436154 (-) True CI01000228_00432311_00436091
CI01000228_00043461_00055521.mRNA mRNA downstream 455750 42481 ~ 57275 (-) True CI01000228_00043461_00055521
CI01000228_00030868_00037938.mRNA mRNA downstream 475078 30340 ~ 37947 (-) True CI01000228_00030868_00037938
CI01000228_00017667_00028066.mRNA mRNA downstream 484481 17667 ~ 28544 (-) True CI01000228_00017667_00028066
CI01000228_00583846_00597205.mRNA mRNA upstream 69322 582593 ~ 597757 (-) True CI01000228_00583846_00597205
CI01000228_00600604_00621150.mRNA mRNA upstream 87283 600554 ~ 621150 (-) True CI01000228_00600604_00621150
TU453492 other downstream 34088 478042 ~ 478937 (-) True G395711
TU453483 other downstream 68187 388373 ~ 444838 (-) False G395702

Expression Profile