Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00021678 |
| length | 1177 |
| lncRNA type | sense_over |
| GC content | 0.49 |
| exon number | 4 |
| gene id | XLOC_009640 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007127.7 |
| NCBI id | CM002900.2 |
| chromosome length | 55266484 |
| location | 4132537 ~ 4175024 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0072329 | monocarboxylic acid catabolic process | biological_process |
| GO:0034440 | lipid oxidation | biological_process |
| GO:0006631 | fatty acid metabolic process | biological_process |
| GO:0006635 | fatty acid beta-oxidation | biological_process |
| GO:0009056 | catabolic process | biological_process |
| GO:0009062 | fatty acid catabolic process | biological_process |
| GO:0044242 | cellular lipid catabolic process | biological_process |
| GO:0046395 | carboxylic acid catabolic process | biological_process |
| GO:0019395 | fatty acid oxidation | biological_process |
| GO:0032787 | monocarboxylic acid metabolic process | biological_process |
| GO:0016042 | lipid catabolic process | biological_process |
| GO:0016054 | organic acid catabolic process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00019333 | lncRNA | upstream | 43535 | 4087791 ~ 4089002 (+) | True | XLOC_009639 |
| TCONS_00021872 | lncRNA | upstream | 184220 | 3928089 ~ 3948317 (+) | True | XLOC_009636 |
| TCONS_00019328 | lncRNA | upstream | 200490 | 3928066 ~ 3932047 (+) | False | XLOC_009636 |
| TCONS_00019327 | lncRNA | upstream | 317456 | 3809594 ~ 3815081 (+) | True | XLOC_009635 |
| TCONS_00021677 | lncRNA | upstream | 473120 | 3658327 ~ 3659417 (+) | True | XLOC_009634 |
| TCONS_00021873 | lncRNA | downstream | 13346 | 4152512 ~ 4156503 (+) | False | XLOC_009640 |
| TCONS_00021680 | lncRNA | downstream | 29085 | 4168251 ~ 4175024 (+) | True | XLOC_009640 |
| TCONS_00021874 | lncRNA | downstream | 177003 | 4316169 ~ 4316607 (+) | True | XLOC_009642 |
| TCONS_00021875 | lncRNA | downstream | 191793 | 4330959 ~ 4335864 (+) | True | XLOC_009643 |
| TCONS_00021876 | lncRNA | downstream | 283455 | 4422621 ~ 4427294 (+) | True | XLOC_009644 |
| TCONS_00019332 | mRNA | upstream | 733 | 4078608 ~ 4131804 (+) | False | XLOC_009639 |
| TCONS_00019331 | mRNA | upstream | 44077 | 4078240 ~ 4088460 (+) | False | XLOC_009639 |
| TCONS_00019330 | mRNA | upstream | 61011 | 4055331 ~ 4071526 (+) | True | XLOC_009638 |
| TCONS_00019329 | mRNA | upstream | 130794 | 3982590 ~ 4001743 (+) | True | XLOC_009637 |
| TCONS_00019325 | mRNA | upstream | 942738 | 3185541 ~ 3189799 (+) | True | XLOC_009630 |
| TCONS_00019339 | mRNA | downstream | 39783 | 4178949 ~ 4189851 (+) | False | XLOC_009641 |
| TCONS_00019340 | mRNA | downstream | 41939 | 4181105 ~ 4189851 (+) | False | XLOC_009641 |
| TCONS_00019341 | mRNA | downstream | 43693 | 4182859 ~ 4190726 (+) | True | XLOC_009641 |
| TCONS_00019342 | mRNA | downstream | 358136 | 4497302 ~ 4512795 (+) | False | XLOC_009645 |
| TCONS_00019343 | mRNA | downstream | 358171 | 4497337 ~ 4512795 (+) | True | XLOC_009645 |
| TCONS_00019326 | other | upstream | 778920 | 3353501 ~ 3353617 (+) | True | XLOC_009631 |
| TCONS_00019314 | other | upstream | 1403048 | 2729373 ~ 2729489 (+) | True | XLOC_009620 |
| TCONS_00019309 | other | upstream | 1848363 | 2284056 ~ 2284174 (+) | True | XLOC_009616 |
| TCONS_00019306 | other | upstream | 2391479 | 1740937 ~ 1741058 (+) | True | XLOC_009612 |
| TCONS_00019299 | other | upstream | 2911975 | 1220446 ~ 1220562 (+) | True | XLOC_009606 |
| TCONS_00019348 | other | downstream | 558647 | 4697813 ~ 4707300 (+) | False | XLOC_009649 |
| TCONS_00019354 | other | downstream | 631213 | 4770379 ~ 4779952 (+) | False | XLOC_009652 |
| TCONS_00019355 | other | downstream | 634967 | 4774133 ~ 4776956 (+) | True | XLOC_009652 |
| TCONS_00019358 | other | downstream | 735198 | 4874364 ~ 4874481 (+) | True | XLOC_009654 |
| TCONS_00019362 | other | downstream | 1045236 | 5184402 ~ 5231397 (+) | False | XLOC_009657 |
