RNA id: TU459781



Basic Information


Item Value
RNA id TU459781
length 447
lncRNA type read_through
GC content 0.47
exon number 2
gene id G400526
representative False

Chromosome Information


Item Value
chromosome id CI01000258
NCBI id null
chromosome length 191677
location 14399 ~ 40303 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATGGGATCCTCTTGACTGGGTGGAGCTGGAGATCGAAAGACCAGAGGCATATCCACACAACAGAAAGGCGTTAGAGGACAAGTCGGGGGCTAAAGGAAACCAGCAGAGGCGGGGCTGACAGACTGGCTGAATCAAGAAGAGAAGGCTGGAGAGAGAGGCTGGGTGGGATCAGTGATGATGAAACAGACTTTTTTCAGAATGTCTAAACAGGCTTTATGCTGCCAGTAGCAACAATGAACTTGAGTTGGGCAGGACCAGAGACGATGAATATACACTAGTGCAGGAAGGGACAAGCAGAAGAGAAGGTGTTTCTGAGCGAATCATCATCTCTTGGGTATGTGTGACTCTGTTGATGGGAGTGTCAGTCCTGTTATTATACAAATCAAGATACATCAAGACACGAGGTGACAATCGCACACACGCAAACACACACATGATTTAANNNNN

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU459765 lncRNA downstream 575 41355 ~ 41451 (+) False G400521
TU459767 lncRNA downstream 575 40878 ~ 41451 (+) False CI01000258_00038193_00041078
TU459773 lncRNA downstream 575 40878 ~ 41451 (+) False CI01000258_00038193_00041078
TU459772 lncRNA downstream 2300 42603 ~ 42861 (+) False G400521
TU459775 lncRNA downstream 2300 42603 ~ 42861 (+) True G400521
CI01000258_00000064_00004613.mRNA mRNA upstream 8958 64 ~ 5441 (+) True CI01000258_00000064_00004613
CI01000258_00042250_00044020.mRNA mRNA downstream 1947 42250 ~ 44437 (+) False CI01000258_00042250_00044020
CI01000258_00045044_00048458.mRNA mRNA downstream 4741 45044 ~ 48458 (+) False CI01000258_00045044_00048458
CI01000258_00096312_00110058.mRNA mRNA downstream 56009 96312 ~ 111157 (+) True CI01000258_00096312_00110058
CI01000258_00137907_00154325.mRNA mRNA downstream 95443 135746 ~ 154356 (+) False CI01000258_00137907_00154325
TU459770 other downstream 575 41518 ~ 43226 (+) False G400521
TU459774 other downstream 575 41355 ~ 43226 (+) True G400521
TU459771 other downstream 2300 42603 ~ 42861 (+) False G400521
TU459790 other downstream 5097 48089 ~ 49052 (+) False G400532
TU459791 other downstream 5097 48089 ~ 91641 (+) True G400532

Expression Profile