RNA id: TU464096


Basic Information

Item Value
RNA id TU464096
length 298
lncRNA type antisense_over
GC content 0.63
exon number 2
gene id G403735
representative True

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 285038 ~ 287194 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GGCGGCCTGCGCTGCGACGGCAGTCTGGTTGGCCTGGTGCTGGGCTGCTTTGATCTTGGCCTGCAGGTGTGCCGGAGGGTGGAAATACTTGCACTTCTCGCGCGAAACCTCGAGCTTGTCTGTGCGCAGTAGTTTCTGCGTGGAGGATGAGCTCGGCACGCTAACCGGCGGGCTGCCGGGGACGATGACAGGGGTGCTGGAGAGCATCTCTGTAGGGACCAGACCCATCCCGTGGCTCATGGGAGTCAGATACGGCGCGTAACTCAGTCCAGGGCTTGAGCCCAGACCTTGGCTGACA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU464148 lncRNA downstream 27374 256612 ~ 257664 (-) True G403784
TU464146 lncRNA downstream 31179 253530 ~ 253859 (-) True G403782
TU464145 lncRNA downstream 32835 251838 ~ 252203 (-) True G403781
TU464144 lncRNA downstream 35012 249826 ~ 250026 (-) True G403780
TU464143 lncRNA downstream 36263 248547 ~ 248775 (-) True G403779
TU464165 lncRNA upstream 1490 288684 ~ 288993 (-) True G403801
TU464091 lncRNA upstream 2747 289941 ~ 331840 (-) False G403734
TU464093 lncRNA upstream 10067 297261 ~ 331840 (-) False G403734
TU464092 lncRNA upstream 10350 297544 ~ 311830 (-) True G403734
TU464196 lncRNA upstream 30425 317619 ~ 318293 (-) True G403811
CI01000299_00185106_00209299.mRNA mRNA downstream 75739 184774 ~ 209299 (-) True CI01000299_00185106_00209299
CI01000299_00169255_00170695.mRNA mRNA downstream 114052 169223 ~ 170986 (-) True CI01000299_00169255_00170695
CI01000299_00448948_00449565.mRNA mRNA upstream 161669 448863 ~ 449757 (-) True CI01000299_00448948_00449565
CI01000299_00452374_00452868.mRNA mRNA upstream 164147 451341 ~ 452868 (-) True CI01000299_00452374_00452868
CI01000299_00670925_00672195.mRNA mRNA upstream 383486 670680 ~ 673625 (-) False CI01000299_00670925_00672195
CI01000299_01003547_01034507.mRNA mRNA upstream 716125 1003319 ~ 1034812 (-) True CI01000299_01003547_01034507
CI01000299_01057889_01063623.mRNA mRNA upstream 770626 1057820 ~ 1063623 (-) True CI01000299_01057889_01063623
TU464604 other upstream 383640 670834 ~ 672856 (-) True CI01000299_00670925_00672195
TU464792 other upstream 783413 1070607 ~ 1075891 (-) True G404372
TU465225 other upstream 1372461 1659655 ~ 1660000 (-) True G404784
TU465428 other upstream 1568445 1855639 ~ 1880988 (-) True G404976
TU465509 other upstream 1730493 2017687 ~ 2018050 (-) True G405053

Expression Profile