RNA id: CI01000300_00003224_00007587.mRNA


Basic Information

Item Value
RNA id CI01000300_00003224_00007587.mRNA
length 1776
RNA type mRNA
GC content 0.42
exon number 5
gene id CI01000300_00003224_00007587
representative True

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 3224 ~ 8034 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTTATGTATTGTCCATATTGTGGACTCGAATTGGCTGGACCTATTGGATGCTTTTGTGGTTCCTGTGGTAGCAACATTCAATTTTTGGCACCTTTTCGTCAGAATGGCCCAGGAACTGTGTCAAATGAACTCACAGAGGCAGGCCTAATCCAGAAATATTTCTCAGAGGGCCACACATATGACGTGATCCTTGATTTTCTTGGAACAAAGCTTATCATTTTCCTGAGTCTGAGCACCTTAAAGAGAAGGCTAAGGAATGCAGGCCTAACAAGGAGAACAGACTATACTCCCAGTGGCACTGTGGATGCAGCTATTACACATGAGCTGACAGGCTCCGGTCAGCTTTTAGGCTACAGAGCTCTGTGGCAGACATTGCGACAGGAGTATTTCATGACAGTTAAAAGGGACGATGTAATGCATGCAATTAGCAGACTGGATCCATCAGGAGTTCAACTTCGCCATAGACACAGATTTGTCCAAAGAGGGTACTTTACAGCAGGACCAAACCAAGTGTGGCATGTCGACGGGTATGATAAGCTCAAACCATTTGGTGTTGCCATTGTTGGCTGCATTGATGGGTTTTCTAGGAAAGTGATGTGGCTCAGAAGTGGCAGCTCTAATAACGACCCAGTGATAATTGCATACTATTACCTGCAGTGTGTATCAGACTTCGGACTTCCAGCACGCCTTCGCACAGACTGTGGGACAGAAAATGGCACTATGGTAGCCATTCATTGTGCATTAAGAGCACAGCATACAGATGACTTTGCAGGAGCCCACAGTCACATGACTCGGTTCTGGATTGAGCTCTTCAGTGACCTGAGAGAGAGGCACCTTTTTAATGGCAGCCATGAGCATAAGTGCCTTCTACGGTATGTCTTCTTGAGCATCTTGCAGAAAGACCTTGATGAGTACAGAGAACTTTGGAATAATCACACCATCCACCCTGTTCGTCAGTCTTGTTGTCATTCTGGTAAACCAGAAGCCATGTATCACCTGCCTCAGAGTGGAAAATTACTGAGATACTCAAGTGCTTTCAACCAACTAACCTCTGGCATTCTGCTATCCAACCAATCAGAAGTAGACAACTGTACATCAAATAAAACACTATGGAGAGCTGTGCTTCAACCCCTATTGTCCTGTTATGAACATTCAACTCAGTTTGAAGTCCTAAGCAATCTTGACAAGGATTTCATTAAGCAAGCAGCATCCTGTTTTAGTTCAGAAATAAATAGGGTTATCTTCAAACCAGACAAAGAGACATGTAAGAAGCTGGTGTTTGTGTGCGGTTTCTTCTTGTTCTCCTTATATGGCATTGGTTTTGAATAACTGTAATCATTTCAAGTAAATGGAAAGTGAAAGCAAAACTGCATGTGATGTCCTGTTCTGAGGTCATGTATAGATGTGAAGTCCTTTTCACACATGCAACAACTTTGTTTGTATGTGCATGTGTGTACCTACTTAACCATATTTTGAGGACAAATTTGTATGACAAAAATTTCCAAAACCTCCTTTTGCAGACATCCTCATTTGTAAAAACATCAAAATAAATTAAATATTTTTAAAAAACTTGTAAGGTAAAAATGCAGAACTTTATGCACAGGCTTCCAACAACAACAAAGAAAATGTGTCTTACTTACTAAGAGCAAACAGCATGGAATGTGGGAGGCAACGTTTTTGTTTTGTTTTTTACACAGGAAGGCATGTTCTTGTGTTCAAAGATATCTATATGGAGAGCAGCAGAGTGGATGGGTCTTATCTTAACTTTCAAGCCAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU468861 lncRNA downstream 4440 12474 ~ 12708 (+) True G408052
TU468865 lncRNA downstream 6861 14895 ~ 15169 (+) True G408056
TU468867 lncRNA downstream 8655 16689 ~ 16925 (+) True G408058
TU468868 lncRNA downstream 9924 17958 ~ 18288 (+) True G408059
TU468875 lncRNA downstream 21106 29140 ~ 31266 (+) True G408066
CI01000300_00103395_00123529.mRNA mRNA downstream 95361 103395 ~ 123529 (+) True CI01000300_00103395_00123529
CI01000300_00150486_00160308.mRNA mRNA downstream 142452 150486 ~ 160515 (+) True CI01000300_00150486_00160308
CI01000300_00180177_00181561.mRNA mRNA downstream 172086 180120 ~ 181617 (+) True CI01000300_00180177_00181561
CI01000300_00226653_00303160.mRNA mRNA downstream 218619 226653 ~ 303160 (+) True CI01000300_00226653_00303160
CI01000300_00313257_00313598.mRNA mRNA downstream 305223 313257 ~ 313641 (+) True CI01000300_00313257_00313598
TU469422 other downstream 968566 976600 ~ 977099 (+) True G408510
TU469410 other downstream 1009033 1017067 ~ 1020734 (+) True G408498
TU469837 other downstream 1624996 1633030 ~ 1634969 (+) True G408910
TU469855 other downstream 1741866 1749900 ~ 1759036 (+) False G408928
TU469856 other downstream 1741866 1749900 ~ 1759036 (+) True G408928

Expression Profile