Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00019489 |
| length | 1245 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 8 |
| gene id | XLOC_009735 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007127.7 |
| NCBI id | CM002900.2 |
| chromosome length | 55266484 |
| location | 11558868 ~ 11569729 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-080226-6 | Predicted to be located in membrane. Predicted to be integral component of membrane. Human ortholog(s) of this gene implicated in autosomal dominant nonsyndromic deafness 4B and autosomal recessive nonsyndromic deafness 113. Orthologous to several human genes including CEACAM6 (CEA cell adhesion molecule 6) and CEACAM8 (CEA cell adhesion molecule 8). |
| ensembl_id | ENSDART00000180445 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00021686 | lncRNA | upstream | 182060 | 11361760 ~ 11376845 (+) | True | XLOC_009733 |
| TCONS_00019484 | lncRNA | upstream | 275303 | 11275659 ~ 11283602 (+) | True | XLOC_009731 |
| TCONS_00021685 | lncRNA | upstream | 392193 | 11151776 ~ 11166712 (+) | False | XLOC_009730 |
| TCONS_00021895 | lncRNA | upstream | 638940 | 10918909 ~ 10919965 (+) | False | XLOC_009728 |
| TCONS_00019475 | lncRNA | upstream | 696763 | 10859429 ~ 10862142 (+) | True | XLOC_009727 |
| TCONS_00021896 | lncRNA | downstream | 5745 | 11573189 ~ 11573798 (+) | False | XLOC_009736 |
| TCONS_00021687 | lncRNA | downstream | 13208 | 11580652 ~ 11583878 (+) | True | XLOC_009737 |
| TCONS_00019501 | lncRNA | downstream | 141066 | 11708510 ~ 11709498 (+) | True | XLOC_009744 |
| TCONS_00021897 | lncRNA | downstream | 550187 | 12117631 ~ 12118526 (+) | False | XLOC_009751 |
| TCONS_00021898 | lncRNA | downstream | 550187 | 12117631 ~ 12139336 (+) | True | XLOC_009751 |
| TCONS_00019487 | mRNA | upstream | 2971 | 11483811 ~ 11555934 (+) | False | XLOC_009734 |
| TCONS_00019486 | mRNA | upstream | 2971 | 11483811 ~ 11555934 (+) | True | XLOC_009734 |
| TCONS_00019485 | mRNA | upstream | 214178 | 11297703 ~ 11344727 (+) | True | XLOC_009732 |
| TCONS_00019482 | mRNA | upstream | 266757 | 11242443 ~ 11292148 (+) | False | XLOC_009731 |
| TCONS_00019481 | mRNA | upstream | 334461 | 11188810 ~ 11224444 (+) | True | XLOC_009730 |
| TCONS_00019490 | mRNA | downstream | 6027 | 11573471 ~ 11578407 (+) | True | XLOC_009736 |
| TCONS_00019491 | mRNA | downstream | 18132 | 11585576 ~ 11593545 (+) | True | XLOC_009738 |
| TCONS_00019492 | mRNA | downstream | 29942 | 11597386 ~ 11598447 (+) | True | XLOC_009739 |
| TCONS_00019493 | mRNA | downstream | 35652 | 11603096 ~ 11621551 (+) | True | XLOC_009740 |
| TCONS_00019494 | mRNA | downstream | 56512 | 11623956 ~ 11642009 (+) | True | XLOC_009741 |
| TCONS_00019483 | other | upstream | 268022 | 11242560 ~ 11290883 (+) | False | XLOC_009731 |
| TCONS_00019473 | other | upstream | 702496 | 10841164 ~ 10856409 (+) | False | XLOC_009727 |
| TCONS_00019457 | other | upstream | 1234240 | 10324549 ~ 10324665 (+) | True | XLOC_009715 |
| TCONS_00019455 | other | upstream | 1265968 | 10284258 ~ 10292937 (+) | True | XLOC_009713 |
| TCONS_00019443 | other | upstream | 2000802 | 9540033 ~ 9558103 (+) | True | XLOC_009705 |
| TCONS_00019500 | other | downstream | 133202 | 11700646 ~ 11703337 (+) | False | XLOC_009744 |
| TCONS_00019511 | other | downstream | 674046 | 12241490 ~ 12245896 (+) | False | XLOC_009752 |
| TCONS_00019517 | other | downstream | 732725 | 12300169 ~ 12300286 (+) | True | XLOC_009755 |
| TCONS_00019518 | other | downstream | 813286 | 12380730 ~ 12380846 (+) | True | XLOC_009756 |
| TCONS_00019534 | other | downstream | 1857104 | 13424548 ~ 13441633 (+) | False | XLOC_009767 |
