RNA id: TCONS_00019495



Basic Information


Item Value
RNA id TCONS_00019495
length 643
RNA type mRNA
GC content 0.43
exon number 3
gene id XLOC_009742
representative True

Chromosome Information


Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 11652591 ~ 11653478 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


AAAACATAACAAATGTGAGGCTTACTGGTCCAGAAGAAACCTTAATCGAGGATGAATCATTTGCCAACATCACCTCTGAGGGAAGCGGCACCATAACCTCTGTGCAGTGGATGAAGGATAACAGTCCTCTGTCTTCTAGCAGCAGAATCATCTTCTCATCTGATAACAGATCAGTGTCCATCAGTGCAGTGCAGAGATCAGACACTGGAGAATATCAGTGTACATACAGTAACCCTGTCAGCTCTGAGACAGCAAAACTCACCCTGATCATCAACTATGGGCCAGAAGGTGTTTCTATTAAGGGTCCAGATGAGATGAATTTAGGTGTTCAAGtgtttttgtcttgctttgcAAATTCTGAACCTTCTGCTTCATTCAGCTGGACATTTAATGGGTCAGACACTGGTGTGACCACAGACAAATACACCATTGATAAGACCGATCTCACAGACAGTGGAGAATACATCTGTACAGCCTATAATAGAGTCACAAACAGAAGTGAATCAATAAGACATGTTTTACGCATTCAAGTTGGAGGTGGAGGGCTGTCAACCGGAGCGGTAGTTGGGATTGCCATTGGTGTTTCAGTGGCAGTTTCAGGAATTTGTGGTCTGATTGTctattttacaaaaaacaacatAAT

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000133876

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00021687 lncRNA upstream 68713 11580652 ~ 11583878 (+) True XLOC_009737
TCONS_00021896 lncRNA upstream 78793 11573189 ~ 11573798 (+) False XLOC_009736
TCONS_00021686 lncRNA upstream 275746 11361760 ~ 11376845 (+) True XLOC_009733
TCONS_00019484 lncRNA upstream 368989 11275659 ~ 11283602 (+) True XLOC_009731
TCONS_00021685 lncRNA upstream 485879 11151776 ~ 11166712 (+) False XLOC_009730
TCONS_00019501 lncRNA downstream 55032 11708510 ~ 11709498 (+) True XLOC_009744
TCONS_00021897 lncRNA downstream 464153 12117631 ~ 12118526 (+) False XLOC_009751
TCONS_00021898 lncRNA downstream 464153 12117631 ~ 12139336 (+) True XLOC_009751
TCONS_00019512 lncRNA downstream 590105 12243583 ~ 12246124 (+) True XLOC_009752
TCONS_00019528 lncRNA downstream 1087434 12740912 ~ 12744284 (+) False XLOC_009761
TCONS_00019494 mRNA upstream 10582 11623956 ~ 11642009 (+) True XLOC_009741
TCONS_00019493 mRNA upstream 31040 11603096 ~ 11621551 (+) True XLOC_009740
TCONS_00019492 mRNA upstream 54144 11597386 ~ 11598447 (+) True XLOC_009739
TCONS_00019491 mRNA upstream 59046 11585576 ~ 11593545 (+) True XLOC_009738
TCONS_00019490 mRNA upstream 74184 11573471 ~ 11578407 (+) True XLOC_009736
TCONS_00019496 mRNA downstream 7361 11660839 ~ 11677537 (+) False XLOC_009743
TCONS_00019497 mRNA downstream 7384 11660862 ~ 11680970 (+) True XLOC_009743
TCONS_00019498 mRNA downstream 30070 11683548 ~ 11709591 (+) False XLOC_009744
TCONS_00019499 mRNA downstream 46282 11699760 ~ 11709759 (+) False XLOC_009744
TCONS_00019502 mRNA downstream 70752 11724230 ~ 11760596 (+) True XLOC_009745
TCONS_00019483 other upstream 361708 11242560 ~ 11290883 (+) False XLOC_009731
TCONS_00019473 other upstream 796182 10841164 ~ 10856409 (+) False XLOC_009727
TCONS_00019457 other upstream 1327926 10324549 ~ 10324665 (+) True XLOC_009715
TCONS_00019455 other upstream 1359654 10284258 ~ 10292937 (+) True XLOC_009713
TCONS_00019443 other upstream 2094488 9540033 ~ 9558103 (+) True XLOC_009705
TCONS_00019500 other downstream 47168 11700646 ~ 11703337 (+) False XLOC_009744
TCONS_00019511 other downstream 588012 12241490 ~ 12245896 (+) False XLOC_009752
TCONS_00019517 other downstream 646691 12300169 ~ 12300286 (+) True XLOC_009755
TCONS_00019518 other downstream 727252 12380730 ~ 12380846 (+) True XLOC_009756
TCONS_00019534 other downstream 1771070 13424548 ~ 13441633 (+) False XLOC_009767

Expression Profile


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