Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00019501 |
| length | 809 |
| lncRNA type | retained_intron |
| GC content | 0.34 |
| exon number | 2 |
| gene id | XLOC_009744 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007127.7 |
| NCBI id | CM002900.2 |
| chromosome length | 55266484 |
| location | 11683548 ~ 11709759 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-100921-33 | Predicted to be located in membrane. Predicted to be integral component of membrane. |
| ensembl_id | ENSDART00000148313 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00021687 | lncRNA | upstream | 124632 | 11580652 ~ 11583878 (+) | True | XLOC_009737 |
| TCONS_00021896 | lncRNA | upstream | 134712 | 11573189 ~ 11573798 (+) | False | XLOC_009736 |
| TCONS_00021686 | lncRNA | upstream | 331665 | 11361760 ~ 11376845 (+) | True | XLOC_009733 |
| TCONS_00019484 | lncRNA | upstream | 424908 | 11275659 ~ 11283602 (+) | True | XLOC_009731 |
| TCONS_00021685 | lncRNA | upstream | 541798 | 11151776 ~ 11166712 (+) | False | XLOC_009730 |
| TCONS_00021897 | lncRNA | downstream | 408133 | 12117631 ~ 12118526 (+) | False | XLOC_009751 |
| TCONS_00021898 | lncRNA | downstream | 408133 | 12117631 ~ 12139336 (+) | True | XLOC_009751 |
| TCONS_00019512 | lncRNA | downstream | 534085 | 12243583 ~ 12246124 (+) | True | XLOC_009752 |
| TCONS_00019528 | lncRNA | downstream | 1031414 | 12740912 ~ 12744284 (+) | False | XLOC_009761 |
| TCONS_00019529 | lncRNA | downstream | 1037720 | 12747218 ~ 12748918 (+) | True | XLOC_009761 |
| TCONS_00019497 | mRNA | upstream | 27540 | 11660862 ~ 11680970 (+) | True | XLOC_009743 |
| TCONS_00019496 | mRNA | upstream | 30973 | 11660839 ~ 11677537 (+) | False | XLOC_009743 |
| TCONS_00019495 | mRNA | upstream | 55032 | 11652591 ~ 11653478 (+) | True | XLOC_009742 |
| TCONS_00019494 | mRNA | upstream | 66501 | 11623956 ~ 11642009 (+) | True | XLOC_009741 |
| TCONS_00019493 | mRNA | upstream | 86959 | 11603096 ~ 11621551 (+) | True | XLOC_009740 |
| TCONS_00019502 | mRNA | downstream | 14732 | 11724230 ~ 11760596 (+) | True | XLOC_009745 |
| TCONS_00019503 | mRNA | downstream | 70036 | 11779534 ~ 11785286 (+) | False | XLOC_009746 |
| TCONS_00019504 | mRNA | downstream | 70263 | 11779761 ~ 11780547 (+) | True | XLOC_009746 |
| TCONS_00019505 | mRNA | downstream | 108628 | 11818126 ~ 11825303 (+) | True | XLOC_009747 |
| TCONS_00019506 | mRNA | downstream | 125018 | 11834516 ~ 11840134 (+) | True | XLOC_009748 |
| TCONS_00019500 | other | upstream | 5173 | 11700646 ~ 11703337 (+) | False | XLOC_009744 |
| TCONS_00019483 | other | upstream | 417627 | 11242560 ~ 11290883 (+) | False | XLOC_009731 |
| TCONS_00019473 | other | upstream | 852101 | 10841164 ~ 10856409 (+) | False | XLOC_009727 |
| TCONS_00019457 | other | upstream | 1383845 | 10324549 ~ 10324665 (+) | True | XLOC_009715 |
| TCONS_00019455 | other | upstream | 1415573 | 10284258 ~ 10292937 (+) | True | XLOC_009713 |
| TCONS_00019511 | other | downstream | 531992 | 12241490 ~ 12245896 (+) | False | XLOC_009752 |
| TCONS_00019517 | other | downstream | 590671 | 12300169 ~ 12300286 (+) | True | XLOC_009755 |
| TCONS_00019518 | other | downstream | 671232 | 12380730 ~ 12380846 (+) | True | XLOC_009756 |
| TCONS_00019534 | other | downstream | 1715050 | 13424548 ~ 13441633 (+) | False | XLOC_009767 |
| TCONS_00019535 | other | downstream | 1715053 | 13424551 ~ 13441595 (+) | False | XLOC_009767 |
