Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00019576 |
| length | 679 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 4 |
| gene id | XLOC_009790 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007127.7 |
| NCBI id | CM002900.2 |
| chromosome length | 55266484 |
| location | 14588141 ~ 14675907 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0035556 | intracellular signal transduction | biological_process |
| GO:0006469 | negative regulation of protein kinase activity | biological_process |
| GO:0032007 | negative regulation of TOR signaling | biological_process |
| id | description |
|---|---|
| ko04150 | mTOR signaling pathway |
| ko04140 | Autophagy - animal |
| ko04131 | Membrane trafficking |
| id | description |
|---|---|
| ZDB-GENE-061013-453 | Predicted to act upstream of or within intracellular signal transduction; negative regulation of TOR signaling; and negative regulation of protein kinase activity. Orthologous to human DEPTOR (DEP domain containing MTOR interacting protein). |
| ensembl_id | ENSDART00000133566 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00019572 | lncRNA | upstream | 79949 | 14479551 ~ 14508200 (+) | False | XLOC_009789 |
| TCONS_00019573 | lncRNA | upstream | 79949 | 14505804 ~ 14508200 (+) | True | XLOC_009789 |
| TCONS_00019571 | lncRNA | upstream | 103782 | 14479160 ~ 14484367 (+) | True | XLOC_009788 |
| TCONS_00021693 | lncRNA | upstream | 106348 | 14474856 ~ 14481801 (+) | True | XLOC_009787 |
| TCONS_00021692 | lncRNA | upstream | 111032 | 14474856 ~ 14477117 (+) | False | XLOC_009787 |
| TCONS_00021694 | lncRNA | downstream | 20105 | 14622524 ~ 14622765 (+) | True | XLOC_009791 |
| TCONS_00021695 | lncRNA | downstream | 35626 | 14638045 ~ 14638290 (+) | True | XLOC_009792 |
| TCONS_00021696 | lncRNA | downstream | 38580 | 14640999 ~ 14641398 (+) | True | XLOC_009793 |
| TCONS_00021697 | lncRNA | downstream | 295552 | 14897971 ~ 14898281 (+) | True | XLOC_009795 |
| TCONS_00021905 | lncRNA | downstream | 538483 | 15140902 ~ 15143506 (+) | True | XLOC_009796 |
| TCONS_00019570 | mRNA | upstream | 307549 | 14249546 ~ 14280600 (+) | True | XLOC_009785 |
| TCONS_00019568 | mRNA | upstream | 356837 | 14216581 ~ 14231312 (+) | False | XLOC_009784 |
| TCONS_00019566 | mRNA | upstream | 372532 | 14201401 ~ 14215617 (+) | False | XLOC_009783 |
| TCONS_00019564 | mRNA | upstream | 498680 | 14078748 ~ 14089469 (+) | False | XLOC_009781 |
| TCONS_00019577 | mRNA | downstream | 82497 | 14684916 ~ 14744309 (+) | False | XLOC_009794 |
| TCONS_00019578 | mRNA | downstream | 105541 | 14707960 ~ 14800345 (+) | False | XLOC_009794 |
| TCONS_00019579 | mRNA | downstream | 108017 | 14710436 ~ 15048525 (+) | False | XLOC_009794 |
| TCONS_00019580 | mRNA | downstream | 210166 | 14812585 ~ 15050842 (+) | True | XLOC_009794 |
| TCONS_00019581 | mRNA | downstream | 495344 | 15097763 ~ 15147228 (+) | False | XLOC_009796 |
| TCONS_00019534 | other | upstream | 1146516 | 13424548 ~ 13441633 (+) | False | XLOC_009767 |
| TCONS_00019535 | other | upstream | 1146554 | 13424551 ~ 13441595 (+) | False | XLOC_009767 |
| TCONS_00019518 | other | upstream | 2207303 | 12380730 ~ 12380846 (+) | True | XLOC_009756 |
| TCONS_00019517 | other | upstream | 2287863 | 12300169 ~ 12300286 (+) | True | XLOC_009755 |
| TCONS_00019511 | other | upstream | 2342253 | 12241490 ~ 12245896 (+) | False | XLOC_009752 |
| TCONS_00019585 | other | downstream | 1263805 | 15866224 ~ 15867165 (+) | True | XLOC_009800 |
| TCONS_00019587 | other | downstream | 1551905 | 16154324 ~ 16154458 (+) | True | XLOC_009803 |
| TCONS_00019609 | other | downstream | 2914529 | 17516948 ~ 17517082 (+) | True | XLOC_009816 |
| TCONS_00019610 | other | downstream | 2968391 | 17570810 ~ 17570934 (+) | True | XLOC_009818 |
| TCONS_00019630 | other | downstream | 4462926 | 19065345 ~ 19128471 (+) | False | XLOC_009830 |
