RNA id: TCONS_00019585



Basic Information


Item Value
RNA id TCONS_00019585
length 293
RNA type processed_transcript
GC content 0.43
exon number 3
gene id XLOC_009800
representative True

Chromosome Information


Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 15866224 ~ 15867165 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


acttaattacgaacacctgacctgcagtgcagcagaattcagagagacgcactaacttgcacagcattgaatggaaaaggctttgtccatgtctagttgaggggcatcaagaacacgcagatggcctaaacctgtgtcagcctggacagactgGAGTTCTGCTATTCCTTGccaaggcttttgtatggatgtctgactactactgtgttctctaaaggtattactggagcaaaacaacagcacctgttacagtgaaatttgtattcataaaaatagtgatacatgtgtagcag

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000167981

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00019584 lncRNA upstream 156141 15709411 ~ 15710083 (+) True XLOC_009799
TCONS_00021906 lncRNA upstream 494963 15369692 ~ 15371261 (+) True XLOC_009798
TCONS_00021698 lncRNA upstream 534077 15331862 ~ 15332147 (+) True XLOC_009797
TCONS_00021905 lncRNA upstream 722718 15140902 ~ 15143506 (+) True XLOC_009796
TCONS_00021697 lncRNA upstream 967943 14897971 ~ 14898281 (+) True XLOC_009795
TCONS_00021907 lncRNA downstream 132582 15999747 ~ 16000742 (+) True XLOC_009801
TCONS_00019586 lncRNA downstream 188319 16055484 ~ 16059808 (+) True XLOC_009802
TCONS_00021908 lncRNA downstream 777514 16644679 ~ 16648875 (+) True XLOC_009806
TCONS_00021699 lncRNA downstream 840986 16708151 ~ 16714418 (+) True XLOC_009807
TCONS_00019598 lncRNA downstream 1065882 16933047 ~ 16935466 (+) True XLOC_009809
TCONS_00019581 mRNA upstream 718996 15097763 ~ 15147228 (+) False XLOC_009796
TCONS_00019582 mRNA upstream 719219 15097854 ~ 15147005 (+) False XLOC_009796
TCONS_00019583 mRNA upstream 737062 15114645 ~ 15129162 (+) False XLOC_009796
TCONS_00019580 mRNA upstream 815382 14812585 ~ 15050842 (+) True XLOC_009794
TCONS_00019579 mRNA upstream 817699 14710436 ~ 15048525 (+) False XLOC_009794
TCONS_00019588 mRNA downstream 386545 16253710 ~ 16303451 (+) False XLOC_009804
TCONS_00019589 mRNA downstream 397945 16265110 ~ 16304147 (+) False XLOC_009804
TCONS_00019590 mRNA downstream 398685 16265850 ~ 16304147 (+) False XLOC_009804
TCONS_00019591 mRNA downstream 399263 16266428 ~ 16304147 (+) True XLOC_009804
TCONS_00019592 mRNA downstream 662583 16529748 ~ 16554130 (+) True XLOC_009805
TCONS_00019534 other upstream 2424591 13424548 ~ 13441633 (+) False XLOC_009767
TCONS_00019535 other upstream 2424629 13424551 ~ 13441595 (+) False XLOC_009767
TCONS_00019518 other upstream 3485378 12380730 ~ 12380846 (+) True XLOC_009756
TCONS_00019517 other upstream 3565938 12300169 ~ 12300286 (+) True XLOC_009755
TCONS_00019511 other upstream 3620328 12241490 ~ 12245896 (+) False XLOC_009752
TCONS_00019587 other downstream 287159 16154324 ~ 16154458 (+) True XLOC_009803
TCONS_00019609 other downstream 1649783 17516948 ~ 17517082 (+) True XLOC_009816
TCONS_00019610 other downstream 1703645 17570810 ~ 17570934 (+) True XLOC_009818
TCONS_00019630 other downstream 3198180 19065345 ~ 19128471 (+) False XLOC_009830
TCONS_00019642 other downstream 3837259 19704424 ~ 19704538 (+) True XLOC_009838