Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00019602 |
| length | 642 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 7 |
| gene id | XLOC_009810 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007127.7 |
| NCBI id | CM002900.2 |
| chromosome length | 55266484 |
| location | 16968682 ~ 16991808 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-040801-165 | Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to act upstream of or within translation. Predicted to be located in ribosome and rough endoplasmic reticulum. Predicted to be part of cytosolic large ribosomal subunit. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 18. Orthologous to human RPL18 (ribosomal protein L18). |
| ensembl_id | ENSDART00000043173 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00019598 | lncRNA | upstream | 42320 | 16933047 ~ 16935466 (+) | True | XLOC_009809 |
| TCONS_00021699 | lncRNA | upstream | 263368 | 16708151 ~ 16714418 (+) | True | XLOC_009807 |
| TCONS_00021908 | lncRNA | upstream | 328911 | 16644679 ~ 16648875 (+) | True | XLOC_009806 |
| TCONS_00019586 | lncRNA | upstream | 917978 | 16055484 ~ 16059808 (+) | True | XLOC_009802 |
| TCONS_00021907 | lncRNA | upstream | 977044 | 15999747 ~ 16000742 (+) | True | XLOC_009801 |
| TCONS_00021909 | lncRNA | downstream | 12206 | 17004014 ~ 17004375 (+) | True | XLOC_009811 |
| TCONS_00021910 | lncRNA | downstream | 308345 | 17300153 ~ 17302519 (+) | True | XLOC_009814 |
| TCONS_00021911 | lncRNA | downstream | 556983 | 17548791 ~ 17551059 (+) | True | XLOC_009817 |
| TCONS_00021700 | lncRNA | downstream | 609069 | 17600877 ~ 17601900 (+) | True | XLOC_009819 |
| TCONS_00021701 | lncRNA | downstream | 673954 | 17665762 ~ 17666461 (+) | False | XLOC_009820 |
| TCONS_00019599 | mRNA | upstream | 2522 | 16968682 ~ 16975264 (+) | False | XLOC_009810 |
| TCONS_00019600 | mRNA | upstream | 2997 | 16969060 ~ 16974789 (+) | False | XLOC_009810 |
| TCONS_00019596 | mRNA | upstream | 32136 | 16849242 ~ 16945650 (+) | False | XLOC_009809 |
| TCONS_00019597 | mRNA | upstream | 38685 | 16933002 ~ 16939101 (+) | False | XLOC_009809 |
| TCONS_00019595 | mRNA | upstream | 38697 | 16849220 ~ 16939089 (+) | False | XLOC_009809 |
| TCONS_00019605 | mRNA | downstream | 97306 | 17089114 ~ 17101441 (+) | True | XLOC_009812 |
| TCONS_00019606 | mRNA | downstream | 260679 | 17252487 ~ 17253389 (+) | True | XLOC_009813 |
| TCONS_00019607 | mRNA | downstream | 397308 | 17389116 ~ 17467462 (+) | False | XLOC_009815 |
| TCONS_00019608 | mRNA | downstream | 397327 | 17389135 ~ 17435647 (+) | True | XLOC_009815 |
| TCONS_00019611 | mRNA | downstream | 722856 | 17714664 ~ 17719700 (+) | False | XLOC_009822 |
| TCONS_00019587 | other | upstream | 823328 | 16154324 ~ 16154458 (+) | True | XLOC_009803 |
| TCONS_00019585 | other | upstream | 1110621 | 15866224 ~ 15867165 (+) | True | XLOC_009800 |
| TCONS_00019534 | other | upstream | 3536153 | 13424548 ~ 13441633 (+) | False | XLOC_009767 |
| TCONS_00019535 | other | upstream | 3536191 | 13424551 ~ 13441595 (+) | False | XLOC_009767 |
| TCONS_00019518 | other | upstream | 4596940 | 12380730 ~ 12380846 (+) | True | XLOC_009756 |
| TCONS_00019609 | other | downstream | 525140 | 17516948 ~ 17517082 (+) | True | XLOC_009816 |
| TCONS_00019610 | other | downstream | 579002 | 17570810 ~ 17570934 (+) | True | XLOC_009818 |
| TCONS_00019630 | other | downstream | 2073537 | 19065345 ~ 19128471 (+) | False | XLOC_009830 |
| TCONS_00019642 | other | downstream | 2712616 | 19704424 ~ 19704538 (+) | True | XLOC_009838 |
| TCONS_00019651 | other | downstream | 3176026 | 20167834 ~ 20170828 (+) | True | XLOC_009843 |
