Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00019606 |
| length | 903 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 1 |
| gene id | XLOC_009813 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007127.7 |
| NCBI id | CM002900.2 |
| chromosome length | 55266484 |
| location | 17252487 ~ 17253389 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006383 | transcription by RNA polymerase III | biological_process |
| GO:0000127 | transcription factor TFIIIC complex | cellular_component |
| id | description |
|---|---|
| ko03021 | Transcription machinery |
| id | description |
|---|---|
| ZDB-GENE-040426-1009 | Predicted to be involved in transcription by RNA polymerase III. Predicted to be part of transcription factor TFIIIC complex. Orthologous to human GTF3C6 (general transcription factor IIIC subunit 6). |
| ensembl_id | ENSDART00000063572 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00021909 | lncRNA | upstream | 248112 | 17004014 ~ 17004375 (+) | True | XLOC_009811 |
| TCONS_00019598 | lncRNA | upstream | 317021 | 16933047 ~ 16935466 (+) | True | XLOC_009809 |
| TCONS_00021699 | lncRNA | upstream | 538069 | 16708151 ~ 16714418 (+) | True | XLOC_009807 |
| TCONS_00021908 | lncRNA | upstream | 603612 | 16644679 ~ 16648875 (+) | True | XLOC_009806 |
| TCONS_00019586 | lncRNA | upstream | 1192679 | 16055484 ~ 16059808 (+) | True | XLOC_009802 |
| TCONS_00021910 | lncRNA | downstream | 46764 | 17300153 ~ 17302519 (+) | True | XLOC_009814 |
| TCONS_00021911 | lncRNA | downstream | 295402 | 17548791 ~ 17551059 (+) | True | XLOC_009817 |
| TCONS_00021700 | lncRNA | downstream | 347488 | 17600877 ~ 17601900 (+) | True | XLOC_009819 |
| TCONS_00021701 | lncRNA | downstream | 412373 | 17665762 ~ 17666461 (+) | False | XLOC_009820 |
| TCONS_00021702 | lncRNA | downstream | 412395 | 17665784 ~ 17666931 (+) | True | XLOC_009820 |
| TCONS_00019605 | mRNA | upstream | 151046 | 17089114 ~ 17101441 (+) | True | XLOC_009812 |
| TCONS_00019602 | mRNA | upstream | 260679 | 16977786 ~ 16991808 (+) | False | XLOC_009810 |
| TCONS_00019604 | mRNA | upstream | 260679 | 16978424 ~ 16991808 (+) | True | XLOC_009810 |
| TCONS_00019603 | mRNA | upstream | 260688 | 16977804 ~ 16991799 (+) | False | XLOC_009810 |
| TCONS_00019601 | mRNA | upstream | 260741 | 16969086 ~ 16991746 (+) | False | XLOC_009810 |
| TCONS_00019607 | mRNA | downstream | 135727 | 17389116 ~ 17467462 (+) | False | XLOC_009815 |
| TCONS_00019608 | mRNA | downstream | 135746 | 17389135 ~ 17435647 (+) | True | XLOC_009815 |
| TCONS_00019611 | mRNA | downstream | 461275 | 17714664 ~ 17719700 (+) | False | XLOC_009822 |
| TCONS_00019612 | mRNA | downstream | 461854 | 17715243 ~ 17719694 (+) | False | XLOC_009822 |
| TCONS_00019613 | mRNA | downstream | 461988 | 17715377 ~ 17719792 (+) | True | XLOC_009822 |
| TCONS_00019587 | other | upstream | 1098029 | 16154324 ~ 16154458 (+) | True | XLOC_009803 |
| TCONS_00019585 | other | upstream | 1385322 | 15866224 ~ 15867165 (+) | True | XLOC_009800 |
| TCONS_00019534 | other | upstream | 3810854 | 13424548 ~ 13441633 (+) | False | XLOC_009767 |
| TCONS_00019535 | other | upstream | 3810892 | 13424551 ~ 13441595 (+) | False | XLOC_009767 |
| TCONS_00019518 | other | upstream | 4871641 | 12380730 ~ 12380846 (+) | True | XLOC_009756 |
| TCONS_00019609 | other | downstream | 263559 | 17516948 ~ 17517082 (+) | True | XLOC_009816 |
| TCONS_00019610 | other | downstream | 317421 | 17570810 ~ 17570934 (+) | True | XLOC_009818 |
| TCONS_00019630 | other | downstream | 1811956 | 19065345 ~ 19128471 (+) | False | XLOC_009830 |
| TCONS_00019642 | other | downstream | 2451035 | 19704424 ~ 19704538 (+) | True | XLOC_009838 |
| TCONS_00019651 | other | downstream | 2914445 | 20167834 ~ 20170828 (+) | True | XLOC_009843 |
