RNA id: TCONS_00019608


Basic Information

Item Value
RNA id TCONS_00019608
length 368
RNA type mRNA
GC content 0.51
exon number 5
gene id XLOC_009815
representative True

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 17389116 ~ 17467462 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GGAGAGAATCAGCAGCCAGAACAGAGAAAGGAGATAGAGGAAGAGAGAATGTATAGAGAAAGGCTAGCGCTTCCTTGCTGGTGTCCAGGGCCTTTGTGAATAAACCATGGGATGTATCGGCTCCCGAACCCTCACCTCAGATGGAGTTCCTGTCCAGAAGGATGGGGAACAGcaTGGCCGAACAGACTTTTCATGGGATGGAATCAATTTGTCCATGGAGGACACCACCTCAATCCTTCCTCGGCTGAAGAAACGGAACTCCAATGCCTATGGAATCGGTGCTCTGGCTAAGTCCTCTCTGACAGGTGTGTCAGGAGTGAGTCGCTCTATGAAGGACAAGGTGACAAAACCGACAGCAATGGCTCAGG

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-100922-12 Is expressed in female organism. Orthologous to human FAM131B (family with sequence similarity 131 member B).

Ensembl:

ensembl_id ENSDART00000173448

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00021910 lncRNA upstream 86616 17300153 ~ 17302519 (+) True XLOC_009814
TCONS_00021909 lncRNA upstream 384760 17004014 ~ 17004375 (+) True XLOC_009811
TCONS_00019598 lncRNA upstream 453669 16933047 ~ 16935466 (+) True XLOC_009809
TCONS_00021699 lncRNA upstream 674717 16708151 ~ 16714418 (+) True XLOC_009807
TCONS_00021908 lncRNA upstream 740260 16644679 ~ 16648875 (+) True XLOC_009806
TCONS_00021911 lncRNA downstream 113144 17548791 ~ 17551059 (+) True XLOC_009817
TCONS_00021700 lncRNA downstream 165230 17600877 ~ 17601900 (+) True XLOC_009819
TCONS_00021701 lncRNA downstream 230115 17665762 ~ 17666461 (+) False XLOC_009820
TCONS_00021702 lncRNA downstream 230137 17665784 ~ 17666931 (+) True XLOC_009820
TCONS_00021912 lncRNA downstream 233653 17669300 ~ 17670457 (+) True XLOC_009821
TCONS_00019606 mRNA upstream 135746 17252487 ~ 17253389 (+) True XLOC_009813
TCONS_00019605 mRNA upstream 287694 17089114 ~ 17101441 (+) True XLOC_009812
TCONS_00019602 mRNA upstream 397327 16977786 ~ 16991808 (+) False XLOC_009810
TCONS_00019611 mRNA downstream 279017 17714664 ~ 17719700 (+) False XLOC_009822
TCONS_00019612 mRNA downstream 279596 17715243 ~ 17719694 (+) False XLOC_009822
TCONS_00019613 mRNA downstream 279730 17715377 ~ 17719792 (+) True XLOC_009822
TCONS_00019614 mRNA downstream 328201 17763848 ~ 17798412 (+) False XLOC_009823
TCONS_00019615 mRNA downstream 328248 17763895 ~ 17797950 (+) True XLOC_009823
TCONS_00019587 other upstream 1234677 16154324 ~ 16154458 (+) True XLOC_009803
TCONS_00019585 other upstream 1521970 15866224 ~ 15867165 (+) True XLOC_009800
TCONS_00019534 other upstream 3947502 13424548 ~ 13441633 (+) False XLOC_009767
TCONS_00019535 other upstream 3947540 13424551 ~ 13441595 (+) False XLOC_009767
TCONS_00019518 other upstream 5008289 12380730 ~ 12380846 (+) True XLOC_009756
TCONS_00019609 other downstream 81301 17516948 ~ 17517082 (+) True XLOC_009816
TCONS_00019610 other downstream 135163 17570810 ~ 17570934 (+) True XLOC_009818
TCONS_00019630 other downstream 1629698 19065345 ~ 19128471 (+) False XLOC_009830
TCONS_00019642 other downstream 2268777 19704424 ~ 19704538 (+) True XLOC_009838
TCONS_00019651 other downstream 2732187 20167834 ~ 20170828 (+) True XLOC_009843

Expression Profile

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