RNA id: TCONS_00019612


Basic Information

Item Value
RNA id TCONS_00019612
length 729
RNA type mRNA
GC content 0.40
exon number 5
gene id XLOC_009822
representative False

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 17714664 ~ 17719792 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CAACAGTATCAAGGaagtgttgagtttttttttcttccctcccACACACTGGTTTGGTTAAACTTAAAAATCCAGTTGTACAGGATGAGAGCCATATCTGCAATGGTTTTCCTGGCTTTATGTGCACTGCTGATTATAATCTATCAAGCTGTACAGCAGGAGCTCAACATCCGCAACCTGAAAGCACGCATCATTGTTTCTGGCGAACAGGTGAAGTTGAAGGAAGATGGCATCATGTCAGCTAAGACAAAAGTAGAAGAGATGAACAAGAAGCTCAGTCCTCTGACTACACAGAGGGATCAACTCAAAAAACAGAGGGATGAGATTAAGAAAGGCACTGCTGAATCTGAAAAGGAACTAGGAACCTGCCAAGCTGACAAGGGTAAATTGGAGAAGCAGAGCAGTGATGCAAAAGATGCACTTCAGAAACTAAAGGAAGGCCAAGAGGCTGAGAGGAAGAAAGCAGAGGAGGAGATTGAGGGTCTAAAACGACAAATTCTTGAACGAGATTTAAAGATCTGCAAATACGTTGATGTTACAGTGGAAGAGACAAAgaaattGTGCGCAGGAACTTTGTGAAGGAACTTTAGAAACTCTGTTTTCTCAGCCAAAATGTTctgtattgtgattttttttttccagtgttgaATGTTAAATGTATGTTAAAAAGGTATGGACTGTGCTTCTTTATAAACTCTACACAAAATAAAGTTGTAATAAAGACTTAAA

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-110411-217 No description available

Ensembl:

ensembl_id ENSDART00000149437

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00021912 lncRNA upstream 44786 17669300 ~ 17670457 (+) True XLOC_009821
TCONS_00021702 lncRNA upstream 48312 17665784 ~ 17666931 (+) True XLOC_009820
TCONS_00021701 lncRNA upstream 48782 17665762 ~ 17666461 (+) False XLOC_009820
TCONS_00021700 lncRNA upstream 113343 17600877 ~ 17601900 (+) True XLOC_009819
TCONS_00021911 lncRNA upstream 164184 17548791 ~ 17551059 (+) True XLOC_009817
TCONS_00021703 lncRNA downstream 782872 18502566 ~ 18512199 (+) True XLOC_009826
TCONS_00019622 lncRNA downstream 815962 18535656 ~ 18540899 (+) False XLOC_009827
TCONS_00021704 lncRNA downstream 830829 18550523 ~ 18551058 (+) True XLOC_009827
TCONS_00021913 lncRNA downstream 1323187 19042881 ~ 19124410 (+) False XLOC_009830
TCONS_00019631 lncRNA downstream 1360080 19079774 ~ 19100325 (+) False XLOC_009830
TCONS_00019607 mRNA upstream 247781 17389116 ~ 17467462 (+) False XLOC_009815
TCONS_00019608 mRNA upstream 279596 17389135 ~ 17435647 (+) True XLOC_009815
TCONS_00019606 mRNA upstream 461854 17252487 ~ 17253389 (+) True XLOC_009813
TCONS_00019605 mRNA upstream 613802 17089114 ~ 17101441 (+) True XLOC_009812
TCONS_00019604 mRNA upstream 723435 16978424 ~ 16991808 (+) True XLOC_009810
TCONS_00019614 mRNA downstream 44154 17763848 ~ 17798412 (+) False XLOC_009823
TCONS_00019615 mRNA downstream 44201 17763895 ~ 17797950 (+) True XLOC_009823
TCONS_00019616 mRNA downstream 194242 17913936 ~ 17985859 (+) False XLOC_009824
TCONS_00019617 mRNA downstream 194251 17913945 ~ 18088024 (+) True XLOC_009824
TCONS_00019618 mRNA downstream 422433 18142127 ~ 18151343 (+) False XLOC_009825
TCONS_00019610 other upstream 144309 17570810 ~ 17570934 (+) True XLOC_009818
TCONS_00019609 other upstream 198161 17516948 ~ 17517082 (+) True XLOC_009816
TCONS_00019587 other upstream 1560785 16154324 ~ 16154458 (+) True XLOC_009803
TCONS_00019585 other upstream 1848078 15866224 ~ 15867165 (+) True XLOC_009800
TCONS_00019535 other upstream 4273648 13424551 ~ 13441595 (+) False XLOC_009767
TCONS_00019630 other downstream 1345651 19065345 ~ 19128471 (+) False XLOC_009830
TCONS_00019642 other downstream 1984730 19704424 ~ 19704538 (+) True XLOC_009838
TCONS_00019651 other downstream 2448140 20167834 ~ 20170828 (+) True XLOC_009843
TCONS_00019655 other downstream 2577129 20296823 ~ 20304275 (+) True XLOC_009845
TCONS_00019658 other downstream 2777079 20496773 ~ 20504865 (+) True XLOC_009846

Expression Profile

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