RNA id: CI01000304_07325899_07328203.mRNA


Basic Information

Item Value
RNA id CI01000304_07325899_07328203.mRNA
length 424
RNA type mRNA
GC content 0.31
exon number 5
gene id CI01000304_07325899_07328203
representative True

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 7325648 ~ 7328203 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AGACAAAAGTGCTTGAGAAGAAAGATAGTGATGATAAAGACTCTGAGGAAGACAGCTCTCAACAAAAGACAGCGCACAGCGAGCAGACTGAAGAGAGTGTGAGAAGTGCTGCTTATTTTTGGACCAAAGATGCAACGTTGGCCATCTCCAAAAATACCATTAAAACTAGATAAAATTGGATACTTTAAAATAGCCATCTGAAAATATTCATGTAGAGTTAGAGAAACATATACTCTAGTATCTATAATAATTCACAGCAAGATCAGTAACATTACATACGATTTTATTATTGACTCAACACTTTTGCTTAGGGGTAGAGTATACCGAATGAGGAAAAAAAAAAAAAAAAAAAAAAAAAGTACAAAATTATCGGCATAAATTATTTGCTAAAATTATATAACATGTGTATTGTTGTATTAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU485196 lncRNA downstream 89 7322023 ~ 7325559 (-) False G422442
TU485201 lncRNA downstream 89 7322401 ~ 7325559 (-) True G422442
TU485284 lncRNA downstream 48402 7276999 ~ 7277246 (-) True G422512
TU485238 lncRNA downstream 197625 7127412 ~ 7128023 (-) True G422473
TU485234 lncRNA downstream 203137 7122251 ~ 7122511 (-) True G422469
TU485293 lncRNA upstream 10685 7338888 ~ 7340699 (-) True G422521
TU485300 lncRNA upstream 24461 7352664 ~ 7354386 (-) False G422528
TU485301 lncRNA upstream 24461 7352664 ~ 7354386 (-) True G422528
TU485309 lncRNA upstream 39685 7367888 ~ 7368822 (-) False G422536
TU485311 lncRNA upstream 39685 7367888 ~ 7368822 (-) True G422536
CI01000304_07303509_07309222.mRNA mRNA downstream 13937 7302824 ~ 7311711 (-) True CI01000304_07303509_07309222
CI01000304_07282197_07285838.mRNA mRNA downstream 39810 7281481 ~ 7285838 (-) True CI01000304_07282197_07285838
CI01000304_07218265_07232779.mRNA mRNA downstream 92869 7218220 ~ 7232779 (-) True CI01000304_07218265_07232779
CI01000304_07212382_07216898.mRNA mRNA downstream 108750 7211830 ~ 7216898 (-) True CI01000304_07212382_07216898
CI01000304_07203008_07211715.mRNA mRNA downstream 113933 7202964 ~ 7211715 (-) True CI01000304_07203008_07211715
CI01000304_07464639_07466430.mRNA mRNA upstream 136032 7464235 ~ 7466430 (-) True CI01000304_07464639_07466430
CI01000304_07612069_07709665.mRNA mRNA upstream 283866 7612069 ~ 7709665 (-) True CI01000304_07612069_07709665
CI01000304_07961608_07968820.mRNA mRNA upstream 633362 7961565 ~ 7968949 (-) True CI01000304_07961608_07968820
CI01000304_08165245_08217042.mRNA mRNA upstream 836994 8165197 ~ 8217042 (-) True CI01000304_08165245_08217042
CI01000304_08218405_08218927.mRNA mRNA upstream 889431 8217634 ~ 8218927 (-) True CI01000304_08218405_08218927
TU485117 other downstream 542602 6744679 ~ 6783046 (-) True G422378
TU485082 other downstream 694149 6631086 ~ 6631499 (-) True G422354
TU484956 other downstream 842153 6477451 ~ 6479033 (-) False G422250
TU485601 other upstream 301956 7630159 ~ 7652703 (-) True G422810
TU486232 other upstream 1534020 8862223 ~ 8865296 (-) True G423386
TU487066 other upstream 2240153 9568356 ~ 9569034 (-) True CI01000304_09566730_09575706
TU487077 other upstream 2408543 9739353 ~ 9739471 (-) True G424168
TU487428 other upstream 2825243 10153446 ~ 10164330 (-) False G424458

Expression Profile