RNA id: CI01000304_07352697_07354032.mRNA



Basic Information


Item Value
RNA id CI01000304_07352697_07354032.mRNA
length 773
RNA type mRNA
GC content 0.41
exon number 4
gene id CI01000304_07352697_07354032
representative False

Chromosome Information


Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 7352621 ~ 7354396 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATATAAAAGGAGTGCATGCACCGGTGAGGCACATATCTGTTGAGCACAGGTGAAATAACACATACAAAGGGACAACATGATGTTCTCTAACTCTATGACATTATGGGCAGGCGCTCTGCTTATATTAAGCATCAGTCTATGGTCTACAACAGCTCTTGGTGATGGGGCAGAGGATTGCTGTTTAACCACCAGCGACCGCCACATCCCACGGAGGGTGGTGACGACCTTCACCATTCAGACCGGTGATGGAGCCTGCAGAGTTCCTGCCACTATATTTGTCACAAAGAAGGGCTTGAAGCTCTGTGCACCCTTTCCCAGTGAGAATAACTGGGTAAGCAAACTGATTGACCAAATACTGGCACCACAAAAACCCAAAAAATCGAAAGGAAAGAAACAGAAACACCAGTGAATCAGATTCATACACGTCCAGCCTTCTCTCACACAATGTGCATGTATGGCACTGATCCTAGAACAGATAGCTGATAACACTCATCCTTAATAGTTAATGCTAATTCTCAGGTTTACTACATGTGTACTCTAGCAGAGCAGGTCAAAGTGTGAATCTACTGTCATAGAAAGATATGAGCTATTTGTAAAAAAAATGTGAACTCTTTCCCCCACTGGTCTACATGAAGAGATTTTAAGCTAATATTTCCACCATTTGTTGAGTTTGTATTTTGTCTACATTGTATAAAGTTACTGTTTTTCCTGAGCCATTGAATGAAAATATGTTTTTCTTTTTCTACGTTTTCTCTTTATATTTTGGAATATAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU483971 lncRNA upstream 69491 7280897 ~ 7283130 (+) False G421387
TU483972 lncRNA upstream 69491 7280897 ~ 7283130 (+) True G421387
TU483963 lncRNA upstream 74733 7277630 ~ 7277888 (+) True G421384
TU483962 lncRNA upstream 75359 7276934 ~ 7277262 (+) True G421383
TU483942 lncRNA upstream 149406 7202960 ~ 7203215 (+) True G421369
TU483984 lncRNA downstream 13267 7367663 ~ 7368814 (+) True G421399
TU484020 lncRNA downstream 129079 7483475 ~ 7483688 (+) True G421434
TU484022 lncRNA downstream 130357 7484753 ~ 7484961 (+) True G421436
TU484027 lncRNA downstream 136692 7491088 ~ 7491301 (+) True G421440
TU484030 lncRNA downstream 141634 7496030 ~ 7496396 (+) True G421443
CI01000304_07334198_07342123.mRNA mRNA upstream 10323 7334062 ~ 7342298 (+) True CI01000304_07334198_07342123
CI01000304_07314354_07323703.mRNA mRNA upstream 28003 7313697 ~ 7324618 (+) True CI01000304_07314354_07323703
CI01000304_07288867_07299197.mRNA mRNA upstream 52867 7288867 ~ 7299754 (+) True CI01000304_07288867_07299197
CI01000304_07236677_07272874.mRNA mRNA upstream 79661 7236145 ~ 7272960 (+) True CI01000304_07236677_07272874
CI01000304_07154005_07160649.mRNA mRNA upstream 191496 7154005 ~ 7161125 (+) True CI01000304_07154005_07160649
CI01000304_07409324_07425656.mRNA mRNA downstream 53324 7407720 ~ 7426027 (+) True CI01000304_07409324_07425656
CI01000304_07436662_07442126.mRNA mRNA downstream 82266 7436662 ~ 7442692 (+) True CI01000304_07436662_07442126
CI01000304_07890347_07902088.mRNA mRNA downstream 535951 7890347 ~ 7902758 (+) True CI01000304_07890347_07902088
CI01000304_07909498_07914625.mRNA mRNA downstream 555102 7909498 ~ 7915942 (+) True CI01000304_07909498_07914625
CI01000304_07927790_07957821.mRNA mRNA downstream 573394 7927790 ~ 7958462 (+) True CI01000304_07927790_07957821
TU483706 other upstream 1109624 6241233 ~ 6242997 (+) True G421162
TU483012 other upstream 2175830 5173223 ~ 5173339 (+) True G420524
TU482914 other upstream 3048789 4303336 ~ 4303832 (+) True G420445
TU481280 other upstream 5258943 2092494 ~ 2093678 (+) True G418981
TU480282 other upstream 6477372 872670 ~ 875249 (+) True G418116
TU484021 other downstream 129745 7484141 ~ 7484688 (+) True G421435
TU485573 other downstream 624232 7978628 ~ 7978814 (+) True G422786
TU485809 other downstream 877598 8234441 ~ 8234534 (+) True G423009
TU486091 other downstream 1317374 8671770 ~ 8672555 (+) True CI01000304_08671901_08672203
TU486477 other downstream 1594640 8949036 ~ 8949422 (+) True G423614

Expression Profile