Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU487561 |
| length | 1162 |
| lncRNA type | sense_over |
| GC content | 0.39 |
| exon number | 2 |
| gene id | CI01000304_10451536_10470518 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 10450410 ~ 10471255 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0002286 | T cell activation involved in immune response | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU487340 | lncRNA | upstream | 206153 | 10253047 ~ 10253272 (+) | True | G424376 |
| TU487325 | lncRNA | upstream | 216212 | 10242979 ~ 10243213 (+) | True | G424366 |
| TU487310 | lncRNA | upstream | 238310 | 10219120 ~ 10221115 (+) | True | G424351 |
| TU487188 | lncRNA | upstream | 242570 | 10153444 ~ 10216855 (+) | True | G424248 |
| TU487294 | lncRNA | upstream | 306021 | 10153184 ~ 10153404 (+) | True | G424337 |
| TU487534 | lncRNA | downstream | 62593 | 10523261 ~ 10528247 (+) | True | G424546 |
| TU487535 | lncRNA | downstream | 62593 | 10523261 ~ 10525495 (+) | False | G424546 |
| TU487537 | lncRNA | downstream | 62593 | 10523261 ~ 10523469 (+) | True | G424546 |
| TU487539 | lncRNA | downstream | 71578 | 10532246 ~ 10535441 (+) | True | G424547 |
| TU487538 | lncRNA | downstream | 80801 | 10543664 ~ 10543770 (+) | True | G424547 |
| CI01000304_10327313_10328936.mRNA | mRNA | upstream | 130033 | 10327261 ~ 10329392 (+) | True | CI01000304_10327313_10328936 |
| CI01000304_10316482_10319012.mRNA | mRNA | upstream | 140408 | 10316308 ~ 10319017 (+) | True | CI01000304_10316482_10319012 |
| CI01000304_10292429_10311478.mRNA | mRNA | upstream | 147697 | 10292429 ~ 10311728 (+) | True | CI01000304_10292429_10311478 |
| CI01000304_10276598_10283032.mRNA | mRNA | upstream | 175675 | 10276598 ~ 10283750 (+) | True | CI01000304_10276598_10283032 |
| CI01000304_10256417_10260924.mRNA | mRNA | upstream | 198501 | 10256223 ~ 10260924 (+) | True | CI01000304_10256417_10260924 |
| CI01000304_10473174_10473651.mRNA | mRNA | downstream | 11424 | 10472092 ~ 10473725 (+) | True | CI01000304_10473174_10473651 |
| CI01000304_10489464_10500854.mRNA | mRNA | downstream | 28713 | 10489381 ~ 10501137 (+) | True | CI01000304_10489464_10500854 |
| CI01000304_10504058_10505899.mRNA | mRNA | downstream | 42320 | 10502988 ~ 10506016 (+) | True | CI01000304_10504058_10505899 |
| CI01000304_10512196_10516865.mRNA | mRNA | downstream | 50855 | 10511523 ~ 10516916 (+) | True | CI01000304_10512196_10516865 |
| CI01000304_10528999_10530630.mRNA | mRNA | downstream | 67824 | 10528492 ~ 10530847 (+) | False | CI01000304_10528999_10530630 |
| TU487195 | other | upstream | 266530 | 10189315 ~ 10189404 (+) | True | G424251 |
| TU487194 | other | upstream | 267627 | 10188822 ~ 10189404 (+) | False | G424251 |
| TU487178 | other | upstream | 332103 | 10120399 ~ 10127322 (+) | True | G424246 |
| TU486746 | other | upstream | 893852 | 9564605 ~ 9565573 (+) | True | CI01000304_09564068_09565679 |
| TU486477 | other | upstream | 1510003 | 8949036 ~ 8949422 (+) | True | G423614 |
| TU487556 | other | downstream | 94618 | 10555614 ~ 10555704 (+) | True | G424559 |
| TU488854 | other | downstream | 1968037 | 12434972 ~ 12439086 (+) | False | CI01000304_12437868_12439019 |
| TU488858 | other | downstream | 1968037 | 12436554 ~ 12436605 (+) | True | G425718 |
| TU488852 | other | downstream | 1977136 | 12437804 ~ 12439086 (+) | True | CI01000304_12437868_12439019 |
| TU489575 | other | downstream | 3095783 | 13556451 ~ 13573943 (+) | True | G426349 |
