RNA id: TU481556



Basic Information


Item Value
RNA id TU481556
length 204
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G419238
representative True

Chromosome Information


Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 1315385 ~ 1315588 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CATTTAAATACTACTGTCAGGATTTACTAAAGACACGCAGTAAAAAAATTAGTGATGAAATTGCGTGGACAGTTATTTTTGCGGCTGACCTTATTGCATATACATTTGTAAGAGTTTCCCTTTCATATGCAAAAATTATGGGAGGAGAGTATTTAAATAAATCATGCAACGTGGTTTACTAAGGTTTGTGGCAGTCAATGTAGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU481531 lncRNA downstream 58420 1256680 ~ 1256965 (-) True G419213
TU480885 lncRNA downstream 103512 1211630 ~ 1211873 (-) True G418652
TU480822 lncRNA downstream 130825 1182875 ~ 1184560 (-) True G418589
TU480827 lncRNA downstream 136691 1177781 ~ 1178694 (-) True G418594
TU480880 lncRNA downstream 139377 1175767 ~ 1176008 (-) True G418647
TU481557 lncRNA upstream 1688 1317276 ~ 1317517 (-) True G419239
TU481565 lncRNA upstream 8383 1323971 ~ 1328397 (-) True G419246
TU481500 lncRNA upstream 49465 1365053 ~ 1365559 (-) True CI01000304_01365055_01365447
TU481595 lncRNA upstream 233828 1549416 ~ 1554405 (-) True G419276
TU481604 lncRNA upstream 328457 1644045 ~ 1644279 (-) True G419285
CI01000304_01216763_01232729.mRNA mRNA downstream 82656 1216716 ~ 1232729 (-) True CI01000304_01216763_01232729
CI01000304_01186035_01200177.mRNA mRNA downstream 114577 1185861 ~ 1200808 (-) True CI01000304_01186035_01200177
CI01000304_01054942_01133130.mRNA mRNA downstream 182255 1054942 ~ 1133130 (-) True CI01000304_01054942_01133130
CI01000304_01030191_01033191.mRNA mRNA downstream 282194 1029172 ~ 1033191 (-) True CI01000304_01030191_01033191
CI01000304_00877256_00878179.mRNA mRNA downstream 437206 876134 ~ 878179 (-) True CI01000304_00877256_00878179
CI01000304_01365055_01365447.mRNA mRNA upstream 49213 1364801 ~ 1365447 (-) False CI01000304_01365055_01365447
CI01000304_01403041_01410830.mRNA mRNA upstream 87304 1402892 ~ 1410830 (-) True CI01000304_01403041_01410830
CI01000304_01416856_01418996.mRNA mRNA upstream 101061 1416649 ~ 1419347 (-) True CI01000304_01416856_01418996
CI01000304_01422089_01435801.mRNA mRNA upstream 106501 1422089 ~ 1435801 (-) True CI01000304_01422089_01435801
CI01000304_01439737_01500518.mRNA mRNA upstream 123714 1439302 ~ 1500640 (-) True CI01000304_01439737_01500518
TU481692 other upstream 913796 2229384 ~ 2236106 (-) False G419353
TU481693 other upstream 913796 2229384 ~ 2236106 (-) False G419353
TU481701 other upstream 946914 2262502 ~ 2265185 (-) False G419354
TU481700 other upstream 947150 2262738 ~ 2265340 (-) False G419354
TU481699 other upstream 947504 2263092 ~ 2265185 (-) False G419354

Expression Profile