Item | Value |
---|---|
RNA id | TU483148 |
length | 589 |
lncRNA type | inter_gene |
GC content | 0.54 |
exon number | 1 |
gene id | G420655 |
representative | True |
Item | Value |
---|---|
chromosome id | CI01000304 |
NCBI id | null |
chromosome length | 18613800 |
location | 4620122 ~ 4620710 (+) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
species | grasscarp (Ctenopharyngodon idella) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU483134 | lncRNA | upstream | 67594 | 4552066 ~ 4552528 (+) | True | G420642 |
TU482987 | lncRNA | upstream | 310715 | 4308819 ~ 4309407 (+) | True | G420513 |
TU482978 | lncRNA | upstream | 326183 | 4293565 ~ 4293939 (+) | True | G420504 |
TU482875 | lncRNA | upstream | 344876 | 4233809 ~ 4275246 (+) | True | G420436 |
TU482886 | lncRNA | upstream | 354921 | 4263448 ~ 4265201 (+) | True | G420438 |
TU483156 | lncRNA | downstream | 11620 | 4632330 ~ 4632603 (+) | True | G420663 |
TU483048 | lncRNA | downstream | 18753 | 4639463 ~ 4645086 (+) | True | G420556 |
TU483166 | lncRNA | downstream | 49853 | 4670563 ~ 4670788 (+) | True | G420673 |
TU483046 | lncRNA | downstream | 51724 | 4672434 ~ 4672940 (+) | True | G420554 |
TU483114 | lncRNA | downstream | 164219 | 4784929 ~ 4785256 (+) | True | G420622 |
CI01000304_04563922_04573450.mRNA | mRNA | upstream | 46672 | 4563709 ~ 4573450 (+) | True | CI01000304_04563922_04573450 |
CI01000304_04512680_04515061.mRNA | mRNA | upstream | 103683 | 4512680 ~ 4516439 (+) | True | CI01000304_04512680_04515061 |
CI01000304_04461555_04498385.mRNA | mRNA | upstream | 120434 | 4461186 ~ 4499688 (+) | True | CI01000304_04461555_04498385 |
CI01000304_04407815_04421342.mRNA | mRNA | upstream | 198688 | 4407354 ~ 4421434 (+) | True | CI01000304_04407815_04421342 |
CI01000304_04381131_04396006.mRNA | mRNA | upstream | 224047 | 4381131 ~ 4396075 (+) | True | CI01000304_04381131_04396006 |
CI01000304_04650911_04659754.mRNA | mRNA | downstream | 30201 | 4650911 ~ 4660456 (+) | True | CI01000304_04650911_04659754 |
CI01000304_04679406_04680031.mRNA | mRNA | downstream | 58590 | 4679300 ~ 4680037 (+) | True | CI01000304_04679406_04680031 |
CI01000304_04687431_04705845.mRNA | mRNA | downstream | 66721 | 4687431 ~ 4705942 (+) | True | CI01000304_04687431_04705845 |
CI01000304_04708075_04768393.mRNA | mRNA | downstream | 86695 | 4707405 ~ 4768581 (+) | True | CI01000304_04708075_04768393 |
CI01000304_04866074_04866590.mRNA | mRNA | downstream | 244276 | 4864986 ~ 4867070 (+) | True | CI01000304_04866074_04866590 |
TU482914 | other | upstream | 316290 | 4303336 ~ 4303832 (+) | True | G420445 |
TU481280 | other | upstream | 2526444 | 2092494 ~ 2093678 (+) | True | G418981 |
TU480282 | other | upstream | 3744873 | 872670 ~ 875249 (+) | True | G418116 |
TU480224 | other | upstream | 4055671 | 558092 ~ 564451 (+) | True | G418059 |
TU480131 | other | upstream | 4392269 | 226703 ~ 227853 (+) | True | G417987 |
TU483012 | other | downstream | 552513 | 5173223 ~ 5173339 (+) | True | G420524 |
TU483706 | other | downstream | 1620523 | 6241233 ~ 6242997 (+) | True | G421162 |
TU483945 | other | downstream | 2731939 | 7352649 ~ 7354332 (+) | True | CI01000304_07352697_07354032 |
TU484021 | other | downstream | 2863431 | 7484141 ~ 7484688 (+) | True | G421435 |
TU485573 | other | downstream | 3357918 | 7978628 ~ 7978814 (+) | True | G422786 |
species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
---|---|---|---|---|---|---|---|---|
zebrafish (Danio rerio) | TCONS_00072874 | True | 5201 | mRNA | 0.50 | 1 | NC_007120.7 | 14291932 ~ 14297132 (+) |
rainbow trout (Oncorhynchus mykiss) | TU2581725 | True | 939 | lncRNA | 0.49 | 1 | NC_050571.1 | 17613455 ~ 17614393 (+) |
tiger barb (Puntius tetrazona) | TU225258 | True | 5114 | lncRNA | 0.51 | 2 | NC_056720.1 | 13116438 ~ 13121691 (+) |