RNA id: TU484022


Basic Information

Item Value
RNA id TU484022
length 209
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G421436
representative True

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 7484753 ~ 7484961 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AAACATTTGGCGCATCATAAAGAGGAAGATGCGACAAAGAAGACCACGATTAGCTGGTTCGGGTGTGTTTAATTGGGGTTGAAACTGAACTCTGCAGGACAGTGGTCATCCAGGAGCAGGACTGGACACCTCTAGAGAAAGAAATAAAAACAGTTTTTTTTTTTTTTTTTTTTTTTTTTTAACAAATCCTTTCTGCCATCTGTAGCTGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU484020 lncRNA upstream 1065 7483475 ~ 7483688 (+) True G421434
TU483969 lncRNA upstream 18983 7283206 ~ 7465770 (+) True G421386
TU483984 lncRNA upstream 115939 7367663 ~ 7368814 (+) True G421399
TU483971 lncRNA upstream 201623 7280897 ~ 7283130 (+) False G421387
TU483972 lncRNA upstream 201623 7280897 ~ 7283130 (+) True G421387
TU484027 lncRNA downstream 6127 7491088 ~ 7491301 (+) True G421440
TU484030 lncRNA downstream 11069 7496030 ~ 7496396 (+) True G421443
TU484033 lncRNA downstream 14522 7499483 ~ 7500085 (+) True G421446
TU484034 lncRNA downstream 16102 7501063 ~ 7501334 (+) True G421447
TU484035 lncRNA downstream 16400 7501361 ~ 7501615 (+) True G421448
CI01000304_07436662_07442126.mRNA mRNA upstream 42061 7436662 ~ 7442692 (+) True CI01000304_07436662_07442126
CI01000304_07409324_07425656.mRNA mRNA upstream 58726 7407720 ~ 7426027 (+) True CI01000304_07409324_07425656
CI01000304_07352697_07354032.mRNA mRNA upstream 130357 7352621 ~ 7354396 (+) False CI01000304_07352697_07354032
CI01000304_07334198_07342123.mRNA mRNA upstream 142455 7334062 ~ 7342298 (+) True CI01000304_07334198_07342123
CI01000304_07314354_07323703.mRNA mRNA upstream 160135 7313697 ~ 7324618 (+) True CI01000304_07314354_07323703
CI01000304_07890347_07902088.mRNA mRNA downstream 405386 7890347 ~ 7902758 (+) True CI01000304_07890347_07902088
CI01000304_07909498_07914625.mRNA mRNA downstream 424537 7909498 ~ 7915942 (+) True CI01000304_07909498_07914625
CI01000304_07927790_07957821.mRNA mRNA downstream 442829 7927790 ~ 7958462 (+) True CI01000304_07927790_07957821
CI01000304_07979388_07979919.mRNA mRNA downstream 494117 7979078 ~ 7980720 (+) False CI01000304_07979388_07979919
CI01000304_07989774_08014921.mRNA mRNA downstream 503941 7988902 ~ 8015304 (+) True CI01000304_07989774_08014921
TU484021 other upstream 65 7484141 ~ 7484688 (+) True G421435
TU483945 other upstream 130421 7352649 ~ 7354332 (+) True CI01000304_07352697_07354032
TU483706 other upstream 1241756 6241233 ~ 6242997 (+) True G421162
TU483012 other upstream 2307962 5173223 ~ 5173339 (+) True G420524
TU482914 other upstream 3180921 4303336 ~ 4303832 (+) True G420445
TU485573 other downstream 493667 7978628 ~ 7978814 (+) True G422786
TU485809 other downstream 747033 8234441 ~ 8234534 (+) True G423009
TU486091 other downstream 1186809 8671770 ~ 8672555 (+) True CI01000304_08671901_08672203
TU486477 other downstream 1464075 8949036 ~ 8949422 (+) True G423614
TU486746 other downstream 2079644 9564605 ~ 9565573 (+) True CI01000304_09564068_09565679

Expression Profile