RNA id: TU484035


Basic Information

Item Value
RNA id TU484035
length 255
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G421448
representative True

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 7501361 ~ 7501615 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GCAAAATACAAAGCAGACTTTTTGTGACCTTAATAACAGGTTTAACAGAAATTTGTTATCACATGCTGCATTTCTGATTGCTGTGTGCATGTGGGTGTCTTTGATTTTTTTTTTTTTTTTTTTTTTTTGTGTAGAAAGAGTTCTTGGGTTCACAACAGTAATCCTTGCTCTTTTAAACCATCCATTAGCACCTGTGTTTTTTGAAGAGGCACCAGGAGCAGTCCTCAGAGATGGGCACAAATACATCAAAAAGTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU484034 lncRNA upstream 27 7501063 ~ 7501334 (+) True G421447
TU484033 lncRNA upstream 1276 7499483 ~ 7500085 (+) True G421446
TU484030 lncRNA upstream 4965 7496030 ~ 7496396 (+) True G421443
TU484027 lncRNA upstream 10060 7491088 ~ 7491301 (+) True G421440
TU484022 lncRNA upstream 16400 7484753 ~ 7484961 (+) True G421436
TU484036 lncRNA downstream 1107 7502722 ~ 7503033 (+) True G421449
TU484037 lncRNA downstream 2582 7504197 ~ 7504403 (+) True G421450
TU484038 lncRNA downstream 2876 7504491 ~ 7504735 (+) True G421451
TU484039 lncRNA downstream 3529 7505144 ~ 7505353 (+) True G421452
TU484040 lncRNA downstream 4043 7505658 ~ 7505861 (+) True G421453
CI01000304_07436662_07442126.mRNA mRNA upstream 58669 7436662 ~ 7442692 (+) True CI01000304_07436662_07442126
CI01000304_07409324_07425656.mRNA mRNA upstream 75334 7407720 ~ 7426027 (+) True CI01000304_07409324_07425656
CI01000304_07352697_07354032.mRNA mRNA upstream 146965 7352621 ~ 7354396 (+) False CI01000304_07352697_07354032
CI01000304_07334198_07342123.mRNA mRNA upstream 159063 7334062 ~ 7342298 (+) True CI01000304_07334198_07342123
CI01000304_07314354_07323703.mRNA mRNA upstream 176743 7313697 ~ 7324618 (+) True CI01000304_07314354_07323703
CI01000304_07890347_07902088.mRNA mRNA downstream 388732 7890347 ~ 7902758 (+) True CI01000304_07890347_07902088
CI01000304_07909498_07914625.mRNA mRNA downstream 407883 7909498 ~ 7915942 (+) True CI01000304_07909498_07914625
CI01000304_07927790_07957821.mRNA mRNA downstream 426175 7927790 ~ 7958462 (+) True CI01000304_07927790_07957821
CI01000304_07979388_07979919.mRNA mRNA downstream 477463 7979078 ~ 7980720 (+) False CI01000304_07979388_07979919
CI01000304_07989774_08014921.mRNA mRNA downstream 487287 7988902 ~ 8015304 (+) True CI01000304_07989774_08014921
TU484021 other upstream 16673 7484141 ~ 7484688 (+) True G421435
TU483945 other upstream 147029 7352649 ~ 7354332 (+) True CI01000304_07352697_07354032
TU483706 other upstream 1258364 6241233 ~ 6242997 (+) True G421162
TU483012 other upstream 2324570 5173223 ~ 5173339 (+) True G420524
TU482914 other upstream 3197529 4303336 ~ 4303832 (+) True G420445
TU485573 other downstream 477013 7978628 ~ 7978814 (+) True G422786
TU485809 other downstream 730379 8234441 ~ 8234534 (+) True G423009
TU486091 other downstream 1170155 8671770 ~ 8672555 (+) True CI01000304_08671901_08672203
TU486477 other downstream 1447421 8949036 ~ 8949422 (+) True G423614
TU486746 other downstream 2062990 9564605 ~ 9565573 (+) True CI01000304_09564068_09565679

Expression Profile