RNA id: TU485729



Basic Information


Item Value
RNA id TU485729
length 212
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G422935
representative True

Chromosome Information


Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 7981730 ~ 7981941 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATTAAAATGAAAACAGAAAATTTAAAAATAAAAAATAAAAATTCATAATATTAAAAATACAATAGTATCTCAACACAGGACACCATTCTAAACAACCTACTAATTTCTGGACGTCTATACACCAATAAGCCAAAACATTATGACCACCTGCCTAATATGCTGTTGGTCCTCCATGTGCTGCCAAAACAGCACCGACCTGCCGAGGCATGGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU485727 lncRNA downstream 5339 7975943 ~ 7976391 (-) True G422933
TU485725 lncRNA downstream 11036 7970488 ~ 7970694 (-) True G422931
TU485714 lncRNA downstream 19001 7962370 ~ 7962729 (-) True G422920
TU485712 lncRNA downstream 52224 7928969 ~ 7929506 (-) True G422918
TU485633 lncRNA downstream 61940 7916488 ~ 7919790 (-) True G422841
TU485737 lncRNA upstream 20459 8002400 ~ 8004601 (-) True G422939
TU485745 lncRNA upstream 32101 8014042 ~ 8016684 (-) True G422946
TU485750 lncRNA upstream 47269 8029210 ~ 8029483 (-) True G422951
TU485756 lncRNA upstream 62582 8044523 ~ 8044813 (-) True G422957
TU485758 lncRNA upstream 69153 8051094 ~ 8051602 (-) True G422959
CI01000304_07961608_07968820.mRNA mRNA downstream 12781 7961565 ~ 7968949 (-) True CI01000304_07961608_07968820
CI01000304_07612069_07709665.mRNA mRNA downstream 272065 7612069 ~ 7709665 (-) True CI01000304_07612069_07709665
CI01000304_07464639_07466430.mRNA mRNA downstream 515300 7464235 ~ 7466430 (-) True CI01000304_07464639_07466430
CI01000304_07325899_07328203.mRNA mRNA downstream 653527 7325648 ~ 7328203 (-) True CI01000304_07325899_07328203
CI01000304_07303509_07309222.mRNA mRNA downstream 670019 7302824 ~ 7311711 (-) True CI01000304_07303509_07309222
CI01000304_08165245_08217042.mRNA mRNA upstream 183256 8165197 ~ 8217042 (-) True CI01000304_08165245_08217042
CI01000304_08218405_08218927.mRNA mRNA upstream 235693 8217634 ~ 8218927 (-) True CI01000304_08218405_08218927
CI01000304_08329095_08386362.mRNA mRNA upstream 347154 8329095 ~ 8386362 (-) True CI01000304_08329095_08386362
CI01000304_08510508_08532975.mRNA mRNA upstream 528529 8510470 ~ 8533026 (-) True CI01000304_08510508_08532975
CI01000304_08567281_08570808.mRNA mRNA upstream 585253 8567194 ~ 8570808 (-) True CI01000304_08567281_08570808
TU485601 other downstream 329027 7630159 ~ 7652703 (-) True G422810
TU485117 other downstream 1198684 6744679 ~ 6783046 (-) True G422378
TU485082 other downstream 1350231 6631086 ~ 6631499 (-) True G422354
TU484957 other downstream 1498235 6477451 ~ 6479033 (-) False G422250
TU486232 other upstream 880282 8862223 ~ 8865296 (-) True G423386
TU487066 other upstream 1586415 9568356 ~ 9569034 (-) True CI01000304_09566730_09575706
TU487077 other upstream 1754805 9739353 ~ 9739471 (-) True G424168
TU487428 other upstream 2171505 10153446 ~ 10164330 (-) False G424458
TU487429 other upstream 2171918 10153859 ~ 10164330 (-) True G424458

Expression Profile