RNA id: TU486323



Basic Information


Item Value
RNA id TU486323
length 216
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G423472
representative True

Chromosome Information


Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 8389819 ~ 8390034 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AAAAAAAAATCTATCATGAATAAATAAATTGAAAGGGTCACACTAAAGCTTGTCTACTTGAATGACATTTCTGAAGAATTTATTTATTATTTTAAATGTTTTGCATACATAATTGACCCTTCGCAAAGACCCGCCCCCCTTAGTTACTGTTGCTTTGTCTGACAAGCCATGGCGCTGTCACGCCACACAGAGTGCAAAATACATCGCGGAGCAAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU486302 lncRNA downstream 67023 8317901 ~ 8322796 (-) True G423454
TU486296 lncRNA downstream 85104 8304184 ~ 8304715 (-) True G423448
TU486224 lncRNA downstream 147740 8241860 ~ 8242079 (-) True G423379
TU486220 lncRNA downstream 152689 8236882 ~ 8237130 (-) True G423375
TU486214 lncRNA downstream 154528 8231994 ~ 8235291 (-) True G423369
TU486325 lncRNA upstream 502 8390536 ~ 8390762 (-) True G423474
TU486347 lncRNA upstream 36789 8426823 ~ 8427031 (-) True G423496
TU486352 lncRNA upstream 45232 8435266 ~ 8435602 (-) True G423501
TU486367 lncRNA upstream 66412 8456446 ~ 8456781 (-) True G423516
TU486372 lncRNA upstream 77006 8467040 ~ 8467272 (-) True G423521
CI01000304_08329095_08386362.mRNA mRNA downstream 3457 8329095 ~ 8386362 (-) True CI01000304_08329095_08386362
CI01000304_08218405_08218927.mRNA mRNA downstream 170892 8217634 ~ 8218927 (-) True CI01000304_08218405_08218927
CI01000304_08165245_08217042.mRNA mRNA downstream 172777 8165197 ~ 8217042 (-) True CI01000304_08165245_08217042
CI01000304_07961608_07968820.mRNA mRNA downstream 420870 7961565 ~ 7968949 (-) True CI01000304_07961608_07968820
CI01000304_07612069_07709665.mRNA mRNA downstream 680154 7612069 ~ 7709665 (-) True CI01000304_07612069_07709665
CI01000304_08510508_08532975.mRNA mRNA upstream 120436 8510470 ~ 8533026 (-) True CI01000304_08510508_08532975
CI01000304_08567281_08570808.mRNA mRNA upstream 177160 8567194 ~ 8570808 (-) True CI01000304_08567281_08570808
CI01000304_08605819_08615439.mRNA mRNA upstream 214841 8604875 ~ 8617967 (-) True CI01000304_08605819_08615439
CI01000304_08680653_08681838.mRNA mRNA upstream 290097 8680131 ~ 8682389 (-) True CI01000304_08680653_08681838
CI01000304_08692093_08712203.mRNA mRNA upstream 301925 8691959 ~ 8712203 (-) True CI01000304_08692093_08712203
TU485601 other downstream 737116 7630159 ~ 7652703 (-) True G422810
TU485117 other downstream 1606773 6744679 ~ 6783046 (-) True G422378
TU485082 other downstream 1758320 6631086 ~ 6631499 (-) True G422354
TU484957 other downstream 1906324 6477451 ~ 6479033 (-) False G422250
TU486232 other upstream 472189 8862223 ~ 8865296 (-) True G423386
TU487066 other upstream 1178322 9568356 ~ 9569034 (-) True CI01000304_09566730_09575706
TU487077 other upstream 1346712 9739353 ~ 9739471 (-) True G424168
TU487428 other upstream 1763412 10153446 ~ 10164330 (-) False G424458
TU487429 other upstream 1763825 10153859 ~ 10164330 (-) True G424458

Expression Profile