RNA id: TCONS_00019743


Basic Information

Item Value
RNA id TCONS_00019743
length 717
RNA type mRNA
GC content 0.40
exon number 4
gene id XLOC_009896
representative False

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 23923746 ~ 23924845 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CCGCTGTTGATTCACAATTTAACTTCAGATGGGACAAATTGAGTTGAAACACACCAACGCAGactaaaactaaaaattaTGAAGATTCTCCTGGTTATTACATTGGCGATGTGTACAGGTTGCCAAGCCAACCTTTTCGATGCTGATGAACCCAAGCCACAACTAAAGTTAGCTGATGTATTCAGGAGCTTCGTTGACCAAGCCAGACGCACTGCAGAGGAAACCATTGAGAAGATTCAGACTTCCCAAGTGGGACAAGAACTCAATCAGCACACCACCAACCTGAAGGAAACGATGGATCCTCTGATGACCCAAATCACAGAAGGTGCTGACATGCTAAAGAATCGTATAGAAGAGGAAATGAGCGTTGTAAAGTGTGCACTAAAGCCCTACATTGAAGCTGTCACCGATCCATTTGAGAAGGCAGCAAATCACATGAGAGAAGCTCTGAAATTTGAGAATCTGAAGGGGAGAGAAGTGAAGAGCTGAAAGAGAGTCTGGAGAAAAATGCAAGAACTGAAGACTTTCATAACTGCAATAACAATTGCCCTTTTCATCAACACAGAGTTGTACTAGAATCTTATTTGTTGTATATTTAGAAAGCAATGACCTGTTGAGatgtataatgtaatgtaatgtataaaaTGTGCCTGCTAAACTAGTATTGCTGTGTGGTAAATTAGTAAGCCCAATAAATCCTCCAGAAAAGTATAAATC

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-100922-186 No description available

Ensembl:

ensembl_id ENSDART00000137962

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00019740 lncRNA upstream 8619 23914082 ~ 23915127 (+) True XLOC_009894
TCONS_00021929 lncRNA upstream 102000 23811601 ~ 23821746 (+) False XLOC_009891
TCONS_00019712 lncRNA upstream 626540 23294686 ~ 23297206 (+) True XLOC_009879
TCONS_00019708 lncRNA upstream 1047651 22872860 ~ 22876095 (+) True XLOC_009877
TCONS_00021928 lncRNA upstream 1227250 22695226 ~ 22696496 (+) True XLOC_009875
TCONS_00019749 lncRNA downstream 22444 23947289 ~ 23948093 (+) True XLOC_009897
TCONS_00019752 lncRNA downstream 36064 23960909 ~ 23962471 (+) False XLOC_009898
TCONS_00019763 lncRNA downstream 54535 23979380 ~ 23980174 (+) True XLOC_009900
TCONS_00021711 lncRNA downstream 59910 23984755 ~ 23991159 (+) False XLOC_009901
TCONS_00019766 lncRNA downstream 59932 23984777 ~ 23991098 (+) False XLOC_009901
TCONS_00019741 mRNA upstream 878 23921610 ~ 23922868 (+) False XLOC_009895
TCONS_00019742 mRNA upstream 1005 23921777 ~ 23922741 (+) True XLOC_009895
TCONS_00019738 mRNA upstream 7483 23913943 ~ 23916263 (+) False XLOC_009894
TCONS_00019739 mRNA upstream 7766 23914070 ~ 23915980 (+) False XLOC_009894
TCONS_00019737 mRNA upstream 21307 23891443 ~ 23902439 (+) True XLOC_009893
TCONS_00019745 mRNA downstream 22351 23947196 ~ 23948431 (+) False XLOC_009897
TCONS_00019746 mRNA downstream 22352 23947197 ~ 23948278 (+) False XLOC_009897
TCONS_00019747 mRNA downstream 22358 23947203 ~ 23948042 (+) False XLOC_009897
TCONS_00019748 mRNA downstream 22368 23947213 ~ 23948538 (+) False XLOC_009897
TCONS_00019750 mRNA downstream 35899 23960744 ~ 23963461 (+) False XLOC_009898
TCONS_00019735 other upstream 69135 23837920 ~ 23854611 (+) False XLOC_009892
TCONS_00019728 other upstream 316394 23607231 ~ 23607352 (+) True XLOC_009889
TCONS_00019718 other upstream 524586 23397801 ~ 23399160 (+) False XLOC_009882
TCONS_00019682 other upstream 2220067 21699006 ~ 21703679 (+) False XLOC_009863
TCONS_00019667 other upstream 3010262 20913413 ~ 20913484 (+) True XLOC_009854
TCONS_00019751 other downstream 36026 23960871 ~ 23962929 (+) False XLOC_009898
TCONS_00019767 other downstream 591247 24516092 ~ 24517092 (+) False XLOC_009904
TCONS_00019777 other downstream 956277 24881122 ~ 24881218 (+) True XLOC_009911
TCONS_00019779 other downstream 973326 24898171 ~ 24898253 (+) True XLOC_009912
TCONS_00019780 other downstream 980711 24905556 ~ 24918957 (+) True XLOC_009913

Expression Profile

//