Item | Value |
---|---|
RNA id | TCONS_00019748 |
length | 1046 |
RNA type | mRNA |
GC content | 0.46 |
exon number | 4 |
gene id | XLOC_009897 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_007127.7 |
NCBI id | CM002900.2 |
chromosome length | 55266484 |
location | 23947196 ~ 23948538 (+) |
genome version | GRCz11_2017_zebrafish_Genome |
species | zebrafish (Danio rerio) |
id | name | namespace |
---|---|---|
GO:0042157 | lipoprotein metabolic process | biological_process |
GO:0006869 | lipid transport | biological_process |
GO:0005576 | extracellular region | cellular_component |
GO:0008289 | lipid binding | molecular_function |
id | description |
---|---|
ZDB-GENE-030131-3143 | Predicted to enable lipid binding activity. Predicted to act upstream of or within lipid transport and lipoprotein metabolic process. Predicted to be located in extracellular region. Is expressed in ball; extension; intestine; yolk; and yolk syncytial layer. Human ortholog(s) of this gene implicated in Alzheimer's disease; colitis; myocardial infarction; and ulcerative colitis. Orthologous to human APOA4 (apolipoprotein A4). |
ensembl_id | ENSDART00000142168 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TCONS_00019740 | lncRNA | upstream | 32086 | 23914082 ~ 23915127 (+) | True | XLOC_009894 |
TCONS_00021929 | lncRNA | upstream | 125467 | 23811601 ~ 23821746 (+) | False | XLOC_009891 |
TCONS_00019712 | lncRNA | upstream | 650007 | 23294686 ~ 23297206 (+) | True | XLOC_009879 |
TCONS_00019708 | lncRNA | upstream | 1071118 | 22872860 ~ 22876095 (+) | True | XLOC_009877 |
TCONS_00021928 | lncRNA | upstream | 1250717 | 22695226 ~ 22696496 (+) | True | XLOC_009875 |
TCONS_00019752 | lncRNA | downstream | 12371 | 23960909 ~ 23962471 (+) | False | XLOC_009898 |
TCONS_00019763 | lncRNA | downstream | 30842 | 23979380 ~ 23980174 (+) | True | XLOC_009900 |
TCONS_00021711 | lncRNA | downstream | 36217 | 23984755 ~ 23991159 (+) | False | XLOC_009901 |
TCONS_00019766 | lncRNA | downstream | 36239 | 23984777 ~ 23991098 (+) | False | XLOC_009901 |
TCONS_00021930 | lncRNA | downstream | 36716 | 23985254 ~ 23991098 (+) | True | XLOC_009901 |
TCONS_00019743 | mRNA | upstream | 22368 | 23923746 ~ 23924845 (+) | False | XLOC_009896 |
TCONS_00019744 | mRNA | upstream | 22596 | 23924040 ~ 23924617 (+) | True | XLOC_009896 |
TCONS_00019741 | mRNA | upstream | 24345 | 23921610 ~ 23922868 (+) | False | XLOC_009895 |
TCONS_00019742 | mRNA | upstream | 24472 | 23921777 ~ 23922741 (+) | True | XLOC_009895 |
TCONS_00019738 | mRNA | upstream | 30950 | 23913943 ~ 23916263 (+) | False | XLOC_009894 |
TCONS_00019750 | mRNA | downstream | 12206 | 23960744 ~ 23963461 (+) | False | XLOC_009898 |
TCONS_00019753 | mRNA | downstream | 12395 | 23960933 ~ 23962766 (+) | False | XLOC_009898 |
TCONS_00019754 | mRNA | downstream | 12738 | 23961276 ~ 23963457 (+) | True | XLOC_009898 |
TCONS_00019755 | mRNA | downstream | 23588 | 23972126 ~ 23973718 (+) | False | XLOC_009899 |
TCONS_00019756 | mRNA | downstream | 23588 | 23972126 ~ 23973721 (+) | True | XLOC_009899 |
TCONS_00019735 | other | upstream | 92602 | 23837920 ~ 23854611 (+) | False | XLOC_009892 |
TCONS_00019728 | other | upstream | 339861 | 23607231 ~ 23607352 (+) | True | XLOC_009889 |
TCONS_00019718 | other | upstream | 548053 | 23397801 ~ 23399160 (+) | False | XLOC_009882 |
TCONS_00019682 | other | upstream | 2243534 | 21699006 ~ 21703679 (+) | False | XLOC_009863 |
TCONS_00019667 | other | upstream | 3033729 | 20913413 ~ 20913484 (+) | True | XLOC_009854 |
TCONS_00019751 | other | downstream | 12333 | 23960871 ~ 23962929 (+) | False | XLOC_009898 |
TCONS_00019767 | other | downstream | 567554 | 24516092 ~ 24517092 (+) | False | XLOC_009904 |
TCONS_00019777 | other | downstream | 932584 | 24881122 ~ 24881218 (+) | True | XLOC_009911 |
TCONS_00019779 | other | downstream | 949633 | 24898171 ~ 24898253 (+) | True | XLOC_009912 |
TCONS_00019780 | other | downstream | 957018 | 24905556 ~ 24918957 (+) | True | XLOC_009913 |
species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
---|---|---|---|---|---|---|---|---|
grasscarp (Ctenopharyngodon idella) | CI01000195_00989184_00990148.mRNA | True | 1276 | mRNA | 0.45 | 3 | CI01000195 | 988841 ~ 990313 (-) |