RNA id: TU492306


Basic Information

Item Value
RNA id TU492306
length 262
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G428763
representative True

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 17061850 ~ 17062111 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CTCTTATTCTTGTAAACGGCAATAAAACAGCAATTGTGTTGTGATTTATTGTTTTAAGAAGTTCACACTGCATCTACTATTGCCTATGTAAATTTTATGAAAGTCAACATGAAACTGTTTACTTTCTTACTACACATTTGTGGTTTCATTGTGAATCTTCAAATGCTCCAAGACAACTATTTTCTATGAAGGAAATTTACAGTACGTAGCTCATCTATTTAGATCATGTCGTGCTAAAACTGTGTCTGTTCCACTTGGTCCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU492266 lncRNA downstream 2697 17057985 ~ 17059153 (-) True G428724
TU492268 lncRNA downstream 5409 17054528 ~ 17056441 (-) True G428726
TU492263 lncRNA downstream 36562 17024068 ~ 17025288 (-) True G428721
TU492303 lncRNA downstream 48886 17010779 ~ 17012964 (-) True G428760
TU492278 lncRNA downstream 100518 16961099 ~ 16961332 (-) True G428735
TU492351 lncRNA upstream 59481 17121592 ~ 17147286 (-) True G428807
TU492361 lncRNA upstream 74022 17136133 ~ 17136684 (-) True G428816
TU492384 lncRNA upstream 107220 17169331 ~ 17216801 (-) True G428837
TU492406 lncRNA upstream 157636 17219747 ~ 17220001 (-) True G428859
TU492407 lncRNA upstream 163467 17225578 ~ 17225877 (-) True G428860
CI01000304_17026143_17041443.mRNA mRNA downstream 20314 17026066 ~ 17041536 (-) True CI01000304_17026143_17041443
CI01000304_17003708_17006278.mRNA mRNA downstream 55467 17003365 ~ 17006383 (-) True CI01000304_17003708_17006278
CI01000304_16929873_16945323.mRNA mRNA downstream 115023 16929448 ~ 16946827 (-) True CI01000304_16929873_16945323
CI01000304_16902774_16907628.mRNA mRNA downstream 153031 16902100 ~ 16908819 (-) True CI01000304_16902774_16907628
CI01000304_16874485_16876468.mRNA mRNA downstream 185382 16874275 ~ 16876468 (-) True CI01000304_16874485_16876468
CI01000304_17067366_17070132.mRNA mRNA upstream 5219 17067330 ~ 17070132 (-) True CI01000304_17067366_17070132
CI01000304_17318429_17320775.mRNA mRNA upstream 256313 17318424 ~ 17320898 (-) True CI01000304_17318429_17320775
CI01000304_17332233_17338077.mRNA mRNA upstream 270122 17332233 ~ 17338077 (-) True CI01000304_17332233_17338077
CI01000304_17348461_17354382.mRNA mRNA upstream 285968 17348079 ~ 17354622 (-) True CI01000304_17348461_17354382
CI01000304_17369357_17411120.mRNA mRNA upstream 307043 17369154 ~ 17411203 (-) True CI01000304_17369357_17411120
TU492202 other downstream 194612 16867107 ~ 16867238 (-) True G428668
TU492197 other downstream 280891 16780110 ~ 16780959 (-) True G428665
TU490768 other downstream 1800445 15258964 ~ 15261405 (-) True G427376
TU490815 other downstream 2699958 14361448 ~ 14361892 (-) True G427423
TU490754 other downstream 2774246 14283671 ~ 14286873 (-) True G427362
TU492948 other upstream 861752 17923863 ~ 17924684 (-) True G429331
TU493132 other upstream 1175608 18237719 ~ 18238319 (-) True G429499
TU493327 other upstream 1524331 18586442 ~ 18591856 (-) False G429673
TU493326 other upstream 1527215 18589326 ~ 18591856 (-) True G429673

Expression Profile