Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000306_00245734_00262949.mRNA |
| length | 3631 |
| RNA type | mRNA |
| GC content | 0.56 |
| exon number | 15 |
| gene id | CI01000306_00245734_00262949 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000306 |
| NCBI id | null |
| chromosome length | 11491657 |
| location | 245141 ~ 263251 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| id | description |
|---|---|
| K00280 | LOXL2_3_4; lysyl oxidase-like protein 2/3/4 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU494058 | lncRNA | upstream | 14046 | 230819 ~ 231095 (+) | True | G430283 |
| TU494047 | lncRNA | upstream | 15589 | 217887 ~ 229552 (+) | True | G430272 |
| TU494044 | lncRNA | upstream | 27299 | 217589 ~ 217842 (+) | True | G430271 |
| TU494043 | lncRNA | upstream | 30827 | 214061 ~ 214314 (+) | True | G430270 |
| TU494042 | lncRNA | upstream | 31496 | 213332 ~ 213645 (+) | True | G430269 |
| TU493975 | lncRNA | downstream | 4524 | 267775 ~ 337110 (+) | True | G430207 |
| TU494074 | lncRNA | downstream | 4991 | 268242 ~ 268866 (+) | True | G430297 |
| TU494079 | lncRNA | downstream | 90225 | 354135 ~ 354225 (+) | True | G430302 |
| TU494081 | lncRNA | downstream | 154557 | 417808 ~ 418042 (+) | True | G430303 |
| TU493831 | lncRNA | downstream | 185793 | 449044 ~ 483614 (+) | False | G430067 |
| CI01000306_00235686_00242814.mRNA | mRNA | upstream | 2280 | 235447 ~ 242861 (+) | False | CI01000306_00235686_00242814 |
| CI01000306_00135679_00139917.mRNA | mRNA | upstream | 104687 | 135500 ~ 140454 (+) | True | CI01000306_00135679_00139917 |
| CI01000306_00107710_00118177.mRNA | mRNA | upstream | 126181 | 106737 ~ 118960 (+) | True | CI01000306_00107710_00118177 |
| CI01000306_00044391_00064128.mRNA | mRNA | upstream | 180989 | 43677 ~ 64152 (+) | False | CI01000306_00044391_00064128 |
| CI01000306_00279658_00285330.mRNA | mRNA | downstream | 16407 | 279658 ~ 285494 (+) | True | CI01000306_00279658_00285330 |
| CI01000306_00285981_00288513.mRNA | mRNA | downstream | 22578 | 285829 ~ 288715 (+) | True | CI01000306_00285981_00288513 |
| CI01000306_00297906_00319127.mRNA | mRNA | downstream | 34655 | 297906 ~ 319419 (+) | True | CI01000306_00297906_00319127 |
| CI01000306_00327727_00330881.mRNA | mRNA | downstream | 64476 | 327727 ~ 330932 (+) | True | CI01000306_00327727_00330881 |
| CI01000306_00344942_00353683.mRNA | mRNA | downstream | 81296 | 344547 ~ 354116 (+) | False | CI01000306_00344942_00353683 |
| TU494062 | other | upstream | 7772 | 235614 ~ 237369 (+) | False | CI01000306_00235686_00242814 |
| TU494205 | other | downstream | 662293 | 925544 ~ 999902 (+) | True | G430409 |
| TU494250 | other | downstream | 887346 | 1150597 ~ 1150938 (+) | True | G430452 |
| TU493892 | other | downstream | 946482 | 1218095 ~ 1218557 (+) | True | G430124 |
| TU494557 | other | downstream | 1885131 | 2148382 ~ 2150954 (+) | True | G430719 |
| TU494533 | other | downstream | 2709905 | 2973156 ~ 2979157 (+) | True | CI01000306_02974291_02976718 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00008304 | True | 1143 | mRNA | 0.63 | 7 | NC_007122.7 | 44340212 ~ 44347587 (-) |
| bowfin (Amia calva) | AMCG00003059 | True | 4881 | mRNA | 0.48 | 14 | CM030139.1 | 10624960 ~ 10647910 (-) |
