RNA id: CI01000306_02752480_02764107.mRNA



Basic Information


Item Value
RNA id CI01000306_02752480_02764107.mRNA
length 1469
RNA type mRNA
GC content 0.45
exon number 4
gene id CI01000306_02752480_02764107
representative True

Chromosome Information


Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 2752328 ~ 2764581 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CAATAAATACTCTCTCTGTACCCAGCAATCCATTCCCCTGCCCTCCTGCTCCAAGATTGATCCCTTATCCCCACCCCTTCTTTTCTCTCCCCGCTGCCAGACCCGCAGCTTTAGAACCCATGTGAATAGGTGAAGCTCTGAGGCTCCAACAGATGGCCAGAGCTGCCCTGATTCAGTCACACTGCTGCCGGATGAATACCAGCTCAGAGCGCCCAGAAAAAGTGGAAAAAACAGAGTTCGGGGCGAGCAAAAGAGAGATAGAGAGAGTGATAGAGTTTCCCCCATGTGTGTGGGAGAATAAGGAAAAACAGGGACGTGTTAATATGCATGAGGGAAAGAGTAACTGTGTGAGAGAGGGAAAGAGAGACAACAAGAGAGGGGAGTGGACGATATTGAATTGTAGATTAAGGGACTTCTTTCCCTCCCGCCCTCTTTTATTTATCTGCTATGGAACCACGCCTCCTTTCTTTCACCTCTCCGTGTGTCTATATCAGGGGACCAGCTATGAGAGAGCCCACTTGTACGGCTGGCAGAGGGGGAGTCGTGTCAGAGGTGGTCTGGCGAGGACCGAACAGGATTCTGAGGTGGGCATCAGTGAGGTAAGTGCCTTTGTCCCTAATTACTGCTTGATACCATCACCTCTGTCAGATTTGATGCCAGTAATGGATGCACAGAACTGCTCTCTGGGTCAAGTAGGTCTCCGGAAGCAAGTGATGTTTGGAGTGCTAGAGATTCGCTGGGTAAAATATGCATCAGTGAGCTTGCGCTTGTGTTTGCTGTGTGAGGCTATGAGATTCTACCCGAACCTCTCAATTATTGGTGGTAACAACCTGCGCTGTTCTTTGTGTGAATGTAACGACCATTGTTATCGGCAGGGAAGTAAATGGAGGGGAAAAGCAGTGGAAATTGTGGGAATGGTAATAGTCTTTTTTATGGATTACAGATTACGATCATCAAAGGGGCAGTTTAGAAGGTCCAGTCTCGCCACAGGGTAAAAGATGCAGACATGGGGCCCCAATGACAGCGTCATTAACGAAATGGGCTTTAGTTCAATGACTCCACATTAATGGCCAGTTACCAAATGGAGGGAAAAAGTGACTATTGTAACTGGATACCGTGCAATGATTAGGTAGTGTATTCGCTTAATGTATATACAGTAGAGTATGTGGGAACTGTGTAATACTACCTTGGGAAATGGCATATATTTTCCAACCTTGTTCCATTTTCATTCATTTGGCAGATGTTTTTATCCAAAGCTTCTTACATTGAGTAAATGTATATCTTGAATGCATTTCATTGAGATTCCCTGACAAATCAAAGCCATGTTGTTAGTGCCATGCTCTGTTGATCTACTCCTTGTGCAACATAGTATATGTTTTCTATGTTTTGGCGTGCATGTCATGTCATTGATTCTTCTAAACTGGCATTAGATGGGTTTTAGGAAATTAGCCAAAATATTTAAGACACCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU494675 lncRNA upstream 269287 2482106 ~ 2483041 (+) True G430834
TU494651 lncRNA upstream 365770 2386284 ~ 2386558 (+) True G430811
TU494645 lncRNA upstream 399389 2352711 ~ 2352939 (+) True G430805
TU494585 lncRNA upstream 467042 2270777 ~ 2285286 (+) True G430745
TU494577 lncRNA upstream 559947 2159462 ~ 2192381 (+) True G430739
TU494775 lncRNA downstream 119310 2883891 ~ 3238771 (+) True G430931
TU494528 lncRNA downstream 271487 3036068 ~ 3054700 (+) True G430690
TU494805 lncRNA downstream 285316 3049897 ~ 3050294 (+) True G430951
TU494561 lncRNA downstream 288431 3055130 ~ 3055694 (+) True G430723
TU494554 lncRNA downstream 334063 3098644 ~ 3099359 (+) True G430716
CI01000306_02699041_02741501.mRNA mRNA upstream 10061 2698724 ~ 2742267 (+) True CI01000306_02699041_02741501
CI01000306_02681470_02697984.mRNA mRNA upstream 54344 2681470 ~ 2697984 (+) True CI01000306_02681470_02697984
CI01000306_02678050_02678704.mRNA mRNA upstream 73264 2678050 ~ 2679064 (+) True CI01000306_02678050_02678704
CI01000306_02672497_02676431.mRNA mRNA upstream 75421 2672497 ~ 2676907 (+) True CI01000306_02672497_02676431
CI01000306_02664578_02669105.mRNA mRNA upstream 83091 2664578 ~ 2669237 (+) True CI01000306_02664578_02669105
CI01000306_02777496_02790606.mRNA mRNA downstream 12821 2777402 ~ 2791125 (+) True CI01000306_02777496_02790606
CI01000306_02807061_02829421.mRNA mRNA downstream 42480 2807061 ~ 2829421 (+) True CI01000306_02807061_02829421
CI01000306_02835681_02847361.mRNA mRNA downstream 71100 2835681 ~ 2849257 (+) True CI01000306_02835681_02847361
CI01000306_02881627_02896122.mRNA mRNA downstream 117046 2881627 ~ 2896959 (+) True CI01000306_02881627_02896122
CI01000306_02898289_02901410.mRNA mRNA downstream 133708 2898289 ~ 2901484 (+) True CI01000306_02898289_02901410
TU494557 other upstream 601374 2148382 ~ 2150954 (+) True G430719
TU493892 other upstream 1533771 1218095 ~ 1218557 (+) True G430124
TU494250 other upstream 1601390 1150597 ~ 1150938 (+) True G430452
TU494205 other upstream 1752426 925544 ~ 999902 (+) True G430409
TU494061 other upstream 2514959 236911 ~ 237369 (+) True CI01000306_00235686_00242814
TU494533 other downstream 208575 2973156 ~ 2979157 (+) True CI01000306_02974291_02976718
TU495068 other downstream 1009563 3774144 ~ 3774262 (+) True G431188
TU495067 other downstream 1009602 3774183 ~ 3774262 (+) True G431188
TU495118 other downstream 1013471 3778052 ~ 3783019 (+) False CI01000306_03778075_03781910
TU495119 other downstream 1013471 3778052 ~ 3783019 (+) True CI01000306_03778075_03781910

Expression Profile