Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000306_03123572_03128332.mRNA |
| length | 3058 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 11 |
| gene id | CI01000306_03123572_03128332 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000306 |
| NCBI id | null |
| chromosome length | 11491657 |
| location | 3123434 ~ 3129725 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0008020 | G protein-coupled photoreceptor activity | molecular_function |
| id | description |
|---|---|
| K04251 | OPN1LW, OPN1MW; long/medium wavelength-sensitive opsin |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU494554 | lncRNA | upstream | 24075 | 3098644 ~ 3099359 (+) | True | G430716 |
| TU494561 | lncRNA | upstream | 67364 | 3055130 ~ 3055694 (+) | True | G430723 |
| TU494528 | lncRNA | upstream | 68734 | 3036068 ~ 3054700 (+) | True | G430690 |
| TU494805 | lncRNA | upstream | 73140 | 3049897 ~ 3050294 (+) | True | G430951 |
| TU494675 | lncRNA | upstream | 640393 | 2482106 ~ 2483041 (+) | True | G430834 |
| TU494841 | lncRNA | downstream | 151006 | 3280731 ~ 3280990 (+) | True | G430987 |
| TU494911 | lncRNA | downstream | 230052 | 3359777 ~ 3370252 (+) | True | G431039 |
| TU494985 | lncRNA | downstream | 357798 | 3487523 ~ 3488001 (+) | True | G431107 |
| TU495003 | lncRNA | downstream | 388329 | 3518054 ~ 3518312 (+) | True | G431125 |
| TU495007 | lncRNA | downstream | 402169 | 3531894 ~ 3532107 (+) | True | G431129 |
| CI01000306_03118178_03120842.mRNA | mRNA | upstream | 2511 | 3117988 ~ 3120923 (+) | True | CI01000306_03118178_03120842 |
| CI01000306_03081487_03082695.mRNA | mRNA | upstream | 39125 | 3080835 ~ 3084309 (+) | True | CI01000306_03081487_03082695 |
| CI01000306_03062452_03066451.mRNA | mRNA | upstream | 56778 | 3062452 ~ 3066656 (+) | True | CI01000306_03062452_03066451 |
| CI01000306_03048314_03055936.mRNA | mRNA | upstream | 67336 | 3048314 ~ 3056098 (+) | False | CI01000306_03048314_03055936 |
| CI01000306_03018466_03023859.mRNA | mRNA | upstream | 99343 | 3018134 ~ 3024091 (+) | True | CI01000306_03018466_03023859 |
| CI01000306_03132695_03139713.mRNA | mRNA | downstream | 2970 | 3132695 ~ 3139724 (+) | True | CI01000306_03132695_03139713 |
| CI01000306_03141095_03149372.mRNA | mRNA | downstream | 11370 | 3141095 ~ 3149434 (+) | True | CI01000306_03141095_03149372 |
| CI01000306_03163659_03168243.mRNA | mRNA | downstream | 33548 | 3163273 ~ 3168338 (+) | True | CI01000306_03163659_03168243 |
| CI01000306_03172031_03180084.mRNA | mRNA | downstream | 42035 | 3171760 ~ 3180888 (+) | True | CI01000306_03172031_03180084 |
| CI01000306_03196205_03203310.mRNA | mRNA | downstream | 66480 | 3196205 ~ 3204162 (+) | True | CI01000306_03196205_03203310 |
| TU494533 | other | upstream | 144277 | 2973156 ~ 2979157 (+) | True | CI01000306_02974291_02976718 |
| TU494557 | other | upstream | 972480 | 2148382 ~ 2150954 (+) | True | G430719 |
| TU493892 | other | upstream | 1904877 | 1218095 ~ 1218557 (+) | True | G430124 |
| TU494250 | other | upstream | 1972496 | 1150597 ~ 1150938 (+) | True | G430452 |
| TU494205 | other | upstream | 2123532 | 925544 ~ 999902 (+) | True | G430409 |
| TU495068 | other | downstream | 644419 | 3774144 ~ 3774262 (+) | True | G431188 |
| TU495067 | other | downstream | 644458 | 3774183 ~ 3774262 (+) | True | G431188 |
| TU495118 | other | downstream | 648327 | 3778052 ~ 3783019 (+) | False | CI01000306_03778075_03781910 |
| TU495119 | other | downstream | 648327 | 3778052 ~ 3783019 (+) | True | CI01000306_03778075_03781910 |
| TU495134 | other | downstream | 678508 | 3808233 ~ 3808998 (+) | True | CI01000306_03807268_03810946 |
