Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000306_05826877_05830536.mRNA |
| length | 2025 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 6 |
| gene id | CI01000306_05826877_05830536 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000306 |
| NCBI id | null |
| chromosome length | 11491657 |
| location | 5826081 ~ 5831069 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0005575 | cellular_component | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU497164 | lncRNA | upstream | 57015 | 5751669 ~ 5769066 (+) | True | G432982 |
| TU497129 | lncRNA | upstream | 152786 | 5664915 ~ 5673295 (+) | True | G432947 |
| TU497253 | lncRNA | upstream | 252008 | 5573601 ~ 5574073 (+) | True | G433070 |
| TU497249 | lncRNA | upstream | 260843 | 5565027 ~ 5565238 (+) | True | G433066 |
| TU497248 | lncRNA | upstream | 262409 | 5563418 ~ 5563672 (+) | True | G433065 |
| TU497173 | lncRNA | downstream | 54131 | 5885200 ~ 5887156 (+) | True | G432991 |
| TU497320 | lncRNA | downstream | 59892 | 5890961 ~ 5891184 (+) | True | G433120 |
| TU497143 | lncRNA | downstream | 60791 | 5891860 ~ 5892292 (+) | True | G432961 |
| TU497324 | lncRNA | downstream | 76218 | 5907287 ~ 5908200 (+) | False | G433123 |
| TU497323 | lncRNA | downstream | 76368 | 5907437 ~ 5909232 (+) | True | G433123 |
| CI01000306_05805669_05822854.mRNA | mRNA | upstream | 2673 | 5805669 ~ 5823408 (+) | True | CI01000306_05805669_05822854 |
| CI01000306_05755968_05757253.mRNA | mRNA | upstream | 68691 | 5755779 ~ 5757390 (+) | False | CI01000306_05755968_05757253 |
| CI01000306_05740500_05745336.mRNA | mRNA | upstream | 80608 | 5740321 ~ 5745473 (+) | True | CI01000306_05740500_05745336 |
| CI01000306_05680240_05680527.mRNA | mRNA | upstream | 145046 | 5679746 ~ 5681035 (+) | True | CI01000306_05680240_05680527 |
| CI01000306_05650597_05655729.mRNA | mRNA | upstream | 170128 | 5650597 ~ 5655953 (+) | True | CI01000306_05650597_05655729 |
| CI01000306_05835418_05846769.mRNA | mRNA | downstream | 4349 | 5835418 ~ 5846959 (+) | True | CI01000306_05835418_05846769 |
| CI01000306_05848803_05855772.mRNA | mRNA | downstream | 17734 | 5848803 ~ 5855873 (+) | True | CI01000306_05848803_05855772 |
| CI01000306_05857348_05858295.mRNA | mRNA | downstream | 26279 | 5857348 ~ 5859414 (+) | True | CI01000306_05857348_05858295 |
| CI01000306_05864099_05864974.mRNA | mRNA | downstream | 33030 | 5864099 ~ 5864974 (+) | True | CI01000306_05864099_05864974 |
| CI01000306_05870047_05877183.mRNA | mRNA | downstream | 38269 | 5869338 ~ 5877194 (+) | True | CI01000306_05870047_05877183 |
| TU497140 | other | upstream | 165912 | 5658928 ~ 5660169 (+) | True | G432958 |
| TU496836 | other | upstream | 1303545 | 4522182 ~ 4522536 (+) | False | G432678 |
| TU496834 | other | upstream | 1303545 | 4522210 ~ 4522536 (+) | True | G432678 |
| TU496727 | other | upstream | 1498259 | 4326402 ~ 4327822 (+) | True | G432583 |
| TU495134 | other | upstream | 2017083 | 3808233 ~ 3808998 (+) | True | CI01000306_03807268_03810946 |
| TU497329 | other | downstream | 149444 | 5980513 ~ 5980671 (+) | True | G433126 |
| TU497968 | other | downstream | 275074 | 6106983 ~ 6107080 (+) | True | G433684 |
| TU498010 | other | downstream | 277542 | 6108611 ~ 6129778 (+) | True | G433724 |
| TU498892 | other | downstream | 1288248 | 7119317 ~ 7119859 (+) | True | G434545 |
| TU499876 | other | downstream | 3394496 | 9225565 ~ 9226506 (+) | False | CI01000306_09225597_09230504 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00006915 | False | 1325 | mRNA | 0.43 | 6 | NC_007122.7 | 30244356 ~ 30252098 (+) |
| bowfin (Amia calva) | AMCG00014172 | True | 618 | mRNA | 0.57 | 4 | CM030128.1 | 3372298 ~ 3375153 (-) |
