RNA id: TU495941


Basic Information

Item Value
RNA id TU495941
length 224
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G431916
representative True

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 1806845 ~ 1807068 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TTCCTTTTCAAAGTGGCATCCAGACCAAACGGTGCCAGTGTAAACAGACTCTATCTATCTATCCATCTATCTATCTATCTATCTGTCTGTTTGTCTATCAGTCTGTCTGTCTGTCTGTCTGTCTGTCTATCTATCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTTTGTCTGTCTGTCTGTCTGTCTGTCTATTTGTCTGTCTGTCTATCTATTTGTCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU495938 lncRNA downstream 20589 1785585 ~ 1786256 (-) True G431913
TU495747 lncRNA downstream 52341 1753414 ~ 1754504 (-) True G431747
TU495757 lncRNA downstream 66225 1732745 ~ 1740620 (-) True G431757
TU495746 lncRNA downstream 74420 1727489 ~ 1732425 (-) True G431746
TU495737 lncRNA downstream 100774 1705349 ~ 1706071 (-) True G431737
TU495943 lncRNA upstream 2775 1809843 ~ 1810059 (-) True G431918
TU495751 lncRNA upstream 49729 1856797 ~ 1898332 (-) True G431751
TU495961 lncRNA upstream 91797 1898865 ~ 1899107 (-) True G431933
TU495777 lncRNA upstream 95580 1902648 ~ 1924550 (-) True G431777
TU495729 lncRNA upstream 98669 1905737 ~ 1906926 (-) True CI01000306_01905901_01906725
CI01000306_01792788_01804803.mRNA mRNA downstream 2042 1792788 ~ 1804803 (-) True CI01000306_01792788_01804803
CI01000306_01775235_01776152.mRNA mRNA downstream 30413 1775197 ~ 1776432 (-) True CI01000306_01775235_01776152
CI01000306_01756353_01763570.mRNA mRNA downstream 42599 1756175 ~ 1764246 (-) True CI01000306_01756353_01763570
CI01000306_01723684_01726043.mRNA mRNA downstream 80802 1723679 ~ 1726043 (-) False CI01000306_01723684_01726043
CI01000306_01665458_01676209.mRNA mRNA downstream 130622 1664797 ~ 1676223 (-) True CI01000306_01665458_01676209
CI01000306_01826418_01844251.mRNA mRNA upstream 19029 1826097 ~ 1844251 (-) True CI01000306_01826418_01844251
CI01000306_01859514_01870761.mRNA mRNA upstream 51937 1859005 ~ 1870822 (-) True CI01000306_01859514_01870761
CI01000306_01905901_01906725.mRNA mRNA upstream 98630 1905698 ~ 1907020 (-) False CI01000306_01905901_01906725
CI01000306_01927392_02010649.mRNA mRNA upstream 120265 1927333 ~ 2010774 (-) True CI01000306_01927392_02010649
CI01000306_02022802_02080261.mRNA mRNA upstream 215734 2022802 ~ 2080261 (-) True CI01000306_02022802_02080261
TU495727 other downstream 57895 1748822 ~ 1748950 (-) True G431728
TU495726 other downstream 58623 1747526 ~ 1748222 (-) False G431728
TU495821 other downstream 494411 1311702 ~ 1312434 (-) False G431814
TU495679 other downstream 643507 1163027 ~ 1163338 (-) True G431706
TU495326 other downstream 1323196 481753 ~ 483649 (-) True G431428
TU496065 other upstream 1193168 3000236 ~ 3003891 (-) True G432022
TU497393 other upstream 2735655 4542723 ~ 4545092 (-) True CI01000306_04544349_04545034
TU497685 other upstream 3554575 5361643 ~ 5383763 (-) True G433450
TU497952 other upstream 4233946 6041014 ~ 6041283 (-) True G433670
TU498286 other upstream 4389039 6196107 ~ 6197210 (-) True G433985

Expression Profile