RNA id: TU498929



Basic Information


Item Value
RNA id TU498929
length 201
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G434579
representative True

Chromosome Information


Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 7166795 ~ 7166995 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CATGTGTCTAACATCCAGCAGCTCCGTGATGTCATCATGGAGGAGTGGAAGAGGATCCCAGCAACAACCTGTGCAGCTCTGGTGAACTCCATGCCCAGGAGGATTAAGGCAGTGCTAGATAACAATGGTGCTCACACAAAATATTGACACTTTGGTCACAGTTTTGACATGTTCACTTAGGGTGTACTCACTTTTGTTGCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU498895 lncRNA downstream 46139 7120226 ~ 7120656 (-) True G434548
TU498894 lncRNA downstream 47141 7119324 ~ 7119654 (-) True G434547
TU498888 lncRNA downstream 51840 7114718 ~ 7114955 (-) True G434541
TU498880 lncRNA downstream 58118 7108476 ~ 7108677 (-) True G434533
TU498865 lncRNA downstream 72847 7093668 ~ 7093948 (-) True G434519
TU498947 lncRNA upstream 19432 7186427 ~ 7186660 (-) True G434597
TU498948 lncRNA upstream 19717 7186712 ~ 7187141 (-) True G434598
TU498961 lncRNA upstream 31111 7198106 ~ 7204978 (-) True G434611
TU499032 lncRNA upstream 77013 7244008 ~ 7244315 (-) True G434681
TU499037 lncRNA upstream 88973 7255968 ~ 7256267 (-) True G434686
CI01000306_06998286_07073243.mRNA mRNA downstream 93552 6998286 ~ 7073243 (-) True CI01000306_06998286_07073243
CI01000306_06815523_06829337.mRNA mRNA downstream 337279 6815441 ~ 6829516 (-) True CI01000306_06815523_06829337
CI01000306_06780961_06789374.mRNA mRNA downstream 377201 6780773 ~ 6789594 (-) True CI01000306_06780961_06789374
CI01000306_06776313_06778496.mRNA mRNA downstream 388099 6776114 ~ 6778696 (-) False CI01000306_06776313_06778496
CI01000306_06741870_06743844.mRNA mRNA downstream 422853 6741859 ~ 6743942 (-) True CI01000306_06741870_06743844
CI01000306_07331303_07340271.mRNA mRNA upstream 163957 7330952 ~ 7341271 (-) True CI01000306_07331303_07340271
CI01000306_07561305_07566290.mRNA mRNA upstream 393556 7560551 ~ 7566933 (-) True CI01000306_07561305_07566290
CI01000306_07680537_07684881.mRNA mRNA upstream 512873 7679868 ~ 7685987 (-) True CI01000306_07680537_07684881
CI01000306_07687805_07693178.mRNA mRNA upstream 520611 7687606 ~ 7693178 (-) True CI01000306_07687805_07693178
CI01000306_07694770_07711329.mRNA mRNA upstream 527697 7694692 ~ 7712134 (-) True CI01000306_07694770_07711329
TU498677 other downstream 299859 6866656 ~ 6866936 (-) True G434338
TU498395 other downstream 714544 6437406 ~ 6452251 (-) True G434086
TU498319 other downstream 805152 6355180 ~ 6361643 (-) True G434016
TU498286 other downstream 969585 6196107 ~ 6197210 (-) True G433985
TU497952 other downstream 1125512 6041014 ~ 6041283 (-) True G433670
TU500988 other upstream 2489284 9656279 ~ 9671776 (-) True G436446
TU501173 other upstream 2668030 9835025 ~ 9836323 (-) True G436626
TU501193 other upstream 2855153 10022148 ~ 10025375 (-) True G436643

Expression Profile