RNA id: TU499067


Basic Information

Item Value
RNA id TU499067
length 265
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G434716
representative True

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 7279016 ~ 7279280 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CATGTCGAGGCCTGTTCTGAGTGGAACCTGTCCTGTTAAACCGCTGTATGGTCTTGGCCACCGTGCTGCAGCTCAGTTTCAGGGTCTTGGCAATCTACTTATAGCCTACGCCATCTTTATGTAGAGCAACAATTCTTTTTCAGATCCTCAGAGAGTTCTTTGCCATGAGGTGCCATGTTGAACTTCCAGTGACCAGTATGAGAGAGTGAGAGCGATAACACCAAATTTAACAGACCTGCTCCCCATTCACACCTGAGACCTTGTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU499041 lncRNA downstream 12763 7265914 ~ 7266253 (-) True G434690
TU499023 lncRNA downstream 20581 7258095 ~ 7258435 (-) True G434673
TU499037 lncRNA downstream 22749 7255968 ~ 7256267 (-) True G434686
TU499032 lncRNA downstream 34701 7244008 ~ 7244315 (-) True G434681
TU498961 lncRNA downstream 74038 7198106 ~ 7204978 (-) True G434611
TU499102 lncRNA upstream 31534 7310814 ~ 7311045 (-) True G434747
TU499150 lncRNA upstream 53001 7332281 ~ 7386380 (-) True G434794
TU499208 lncRNA upstream 149287 7428567 ~ 7429273 (-) True G434852
TU500438 lncRNA upstream 255667 7534947 ~ 7536986 (-) True G435961
TU500444 lncRNA upstream 264094 7543374 ~ 7543611 (-) True G435967
CI01000306_06998286_07073243.mRNA mRNA downstream 205773 6998286 ~ 7073243 (-) True CI01000306_06998286_07073243
CI01000306_06815523_06829337.mRNA mRNA downstream 449500 6815441 ~ 6829516 (-) True CI01000306_06815523_06829337
CI01000306_06780961_06789374.mRNA mRNA downstream 489422 6780773 ~ 6789594 (-) True CI01000306_06780961_06789374
CI01000306_06776313_06778496.mRNA mRNA downstream 500320 6776114 ~ 6778696 (-) False CI01000306_06776313_06778496
CI01000306_06741870_06743844.mRNA mRNA downstream 535074 6741859 ~ 6743942 (-) True CI01000306_06741870_06743844
CI01000306_07331303_07340271.mRNA mRNA upstream 51672 7330952 ~ 7341271 (-) True CI01000306_07331303_07340271
CI01000306_07561305_07566290.mRNA mRNA upstream 281271 7560551 ~ 7566933 (-) True CI01000306_07561305_07566290
CI01000306_07680537_07684881.mRNA mRNA upstream 400588 7679868 ~ 7685987 (-) True CI01000306_07680537_07684881
CI01000306_07687805_07693178.mRNA mRNA upstream 408326 7687606 ~ 7693178 (-) True CI01000306_07687805_07693178
CI01000306_07694770_07711329.mRNA mRNA upstream 415412 7694692 ~ 7712134 (-) True CI01000306_07694770_07711329
TU498677 other downstream 412080 6866656 ~ 6866936 (-) True G434338
TU498395 other downstream 826765 6437406 ~ 6452251 (-) True G434086
TU498319 other downstream 917373 6355180 ~ 6361643 (-) True G434016
TU498286 other downstream 1081806 6196107 ~ 6197210 (-) True G433985
TU497952 other downstream 1237733 6041014 ~ 6041283 (-) True G433670
TU500988 other upstream 2376999 9656279 ~ 9671776 (-) True G436446
TU501173 other upstream 2555745 9835025 ~ 9836323 (-) True G436626
TU501193 other upstream 2742868 10022148 ~ 10025375 (-) True G436643

Expression Profile